Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11123808	0.85[EUR][1000 genomes]
rs11677607	0.85[EUR][1000 genomes]
rs11679078	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11680485	0.85[EUR][1000 genomes]
rs11680586	0.85[EUR][1000 genomes]
rs11682173	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11686599	0.84[EUR][1000 genomes]
rs11689956	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11691486	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11692215	0.84[EUR][1000 genomes]
rs12712069	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13000759	0.85[EUR][1000 genomes]
rs13010436	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13011181	0.80[EUR][1000 genomes]
rs13011874	0.85[EUR][1000 genomes]
rs13019618	0.85[EUR][1000 genomes]
rs13022707	0.80[EUR][1000 genomes]
rs13028981	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4850920	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4851254	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4851262	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6713524	0.85[EUR][1000 genomes]
rs7583067	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7596385	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003343	chr2:100241560-100848900	Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv535843	chr2:100241560-100848900	Genic enhancers Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:100791000-100809000	Weak transcription	Right Atrium	heart
2	chr2:100795000-100799000	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr2:100795200-100798600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr2:100795200-100799000	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr2:100796800-100798800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr2:100797600-100798200	Enhancers	Fetal Muscle Leg	muscle
7	chr2:100797600-100798800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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