Variant report

Variant rs12713288
Chromosome Location chr2:55366639-55366640
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55361400-55370200 Enhancers Fetal Intestine Large intestine
2 chr2:55361600-55368200 Weak transcription Esophagus oesophagus
3 chr2:55361800-55366800 Enhancers Rectal Mucosa Donor 31 rectum
4 chr2:55361800-55366800 Weak transcription Hela-S3 cervix
5 chr2:55361800-55367800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr2:55361800-55368000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:55361800-55368600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:55361800-55368800 Weak transcription A549 lung
9 chr2:55361800-55373000 Weak transcription HSMMtube muscle
10 chr2:55361800-55378600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr2:55362200-55367600 Weak transcription Dnd41 blood
12 chr2:55362200-55369000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr2:55362400-55368800 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr2:55363200-55366800 Flanking Active TSS Brain Hippocampus Middle brain
15 chr2:55363200-55367200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr2:55363200-55367800 Enhancers Cortex derived primary cultured neurospheres brain
17 chr2:55363600-55367200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:55363600-55368800 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr2:55363800-55366800 Enhancers Rectal Mucosa Donor 29 rectum
20 chr2:55363800-55367200 Enhancers Stomach Mucosa stomach
21 chr2:55363800-55368600 Weak transcription Pancreas Pancrea
22 chr2:55363800-55370400 Enhancers Duodenum Mucosa Duodenum
23 chr2:55364000-55368600 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr2:55364200-55369000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr2:55364800-55367200 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr2:55364800-55367600 Weak transcription Fetal Thymus thymus
27 chr2:55364800-55369000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr2:55365000-55367000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr2:55365200-55367000 Weak transcription Gastric stomach
30 chr2:55365200-55369000 Flanking Active TSS K562 blood
31 chr2:55365200-55369200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr2:55365200-55381000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr2:55365400-55366800 Flanking Active TSS Brain Anterior Caudate brain
34 chr2:55365400-55367600 Weak transcription Fetal Intestine Small intestine
35 chr2:55365600-55368200 Weak transcription Right Atrium heart
36 chr2:55365600-55378600 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr2:55365800-55366800 Active TSS Rectal Smooth Muscle rectum
38 chr2:55365800-55367200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr2:55365800-55367200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:55365800-55367600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:55365800-55369000 Enhancers Brain Angular Gyrus brain
42 chr2:55365800-55369000 Enhancers Brain Cingulate Gyrus brain
43 chr2:55366000-55367000 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr2:55366000-55367000 Weak transcription Primary hematopoietic stem cells blood
45 chr2:55366000-55368400 Weak transcription Small Intestine intestine
46 chr2:55366000-55368600 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr2:55366000-55368600 Weak transcription Stomach Smooth Muscle stomach
48 chr2:55366200-55366800 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr2:55366200-55368600 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr2:55366200-55368800 Weak transcription Fetal Stomach stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links