Variant report

Variant rs12715880
Chromosome Location chr4:189365383-189365384
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:189353800-189365600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr4:189359200-189373000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr4:189359600-189365400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr4:189361600-189365400 Weak transcription Fetal Intestine Large intestine
5 chr4:189361600-189365600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr4:189361600-189365800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr4:189361800-189365400 Weak transcription HMEC breast
8 chr4:189363600-189366000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:189364200-189365800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr4:189364600-189365600 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr4:189365000-189366000 Enhancers Fetal Intestine Small intestine
12 chr4:189365200-189365400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr4:189365200-189365600 Enhancers Hela-S3 cervix
14 chr4:189365200-189365800 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr4:189365200-189365800 Bivalent Enhancer Pancreatic Islets Pancreatic Islet
16 chr4:189365200-189366000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:189365200-189366000 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr4:189365200-189366000 Flanking Active TSS A549 lung
19 chr4:189365200-189366000 Enhancers NHDF-Ad bronchial
20 chr4:189365200-189366000 Genic enhancers Osteobl bone

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