Variant report

Variant rs420011
Chromosome Location chr4:189361364-189361365
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:189353800-189365600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr4:189356200-189365200 Weak transcription Osteobl bone
3 chr4:189356800-189365200 Weak transcription NHDF-Ad bronchial
4 chr4:189357400-189361600 Enhancers Fetal Intestine Small intestine
5 chr4:189359200-189363600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr4:189359200-189373000 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr4:189359600-189365400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr4:189360400-189361800 Enhancers HMEC breast
9 chr4:189360800-189361400 Active TSS Brain Substantia Nigra brain
10 chr4:189360800-189361600 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr4:189360800-189361600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
12 chr4:189360800-189361600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr4:189360800-189361600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:189360800-189361600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr4:189360800-189361600 Enhancers Brain Cingulate Gyrus brain
16 chr4:189360800-189361600 Enhancers Fetal Heart heart
17 chr4:189360800-189361600 Enhancers Fetal Muscle Trunk muscle
18 chr4:189360800-189361600 Enhancers Fetal Muscle Leg muscle
19 chr4:189360800-189361800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr4:189360800-189361800 Enhancers Brain Germinal Matrix brain
21 chr4:189360800-189361800 Enhancers Brain Inferior Temporal Lobe brain
22 chr4:189360800-189362000 Enhancers Cortex derived primary cultured neurospheres brain
23 chr4:189360800-189362200 Enhancers Fetal Brain Male brain
24 chr4:189361000-189361600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr4:189361000-189361600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr4:189361000-189361600 Enhancers Brain Hippocampus Middle brain
27 chr4:189361000-189361600 Enhancers Fetal Brain Female brain
28 chr4:189361000-189361600 Enhancers A549 lung
29 chr4:189361200-189361400 Enhancers H1 Cell Line embryonic stem cell
30 chr4:189361200-189361400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr4:189361200-189361600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr4:189361200-189361600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr4:189361200-189361600 Flanking Active TSS Brain Angular Gyrus brain
34 chr4:189361200-189361600 Enhancers Esophagus oesophagus
35 chr4:189361200-189361600 Enhancers Fetal Intestine Large intestine
36 chr4:189361200-189361600 Enhancers Left Ventricle heart
37 chr4:189361200-189361600 Enhancers Right Atrium heart
38 chr4:189361200-189361600 Flanking Active TSS Stomach Smooth Muscle stomach

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