The 2.0 version of rSNPBase

Variant report

Variant rs12720491
Chromosome Location chr1:186808626-186808627
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186799400-186810600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr1:186800200-186827800 Weak transcription NHEK skin
3 chr1:186801000-186818400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:186806000-186809800 Enhancers Primary monocytes fromperipheralblood blood
5 chr1:186806000-186810800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:186806800-186808800 Enhancers Fetal Intestine Large intestine
7 chr1:186806800-186809000 Enhancers Duodenum Smooth Muscle Duodenum
8 chr1:186807000-186808800 Enhancers Fetal Kidney kidney
9 chr1:186807000-186808800 Enhancers Rectal Smooth Muscle rectum
10 chr1:186807000-186808800 Enhancers Stomach Mucosa stomach
11 chr1:186807000-186809000 Enhancers Adipose Nuclei Adipose
12 chr1:186807000-186809000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
13 chr1:186807600-186809000 Enhancers Primary B cells from cord blood blood
14 chr1:186807600-186809000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:186807600-186812800 Enhancers Colon Smooth Muscle Colon
16 chr1:186807600-186814400 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr1:186807800-186808800 Enhancers NHDF-Ad bronchial
18 chr1:186807800-186811400 Weak transcription Brain Hippocampus Middle brain
19 chr1:186808000-186809000 Enhancers Duodenum Mucosa Duodenum
20 chr1:186808000-186811600 Weak transcription Hela-S3 cervix
21 chr1:186808200-186808800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
22 chr1:186808200-186809000 Flanking Active TSS Primary hematopoietic stem cells blood
23 chr1:186808400-186809800 Enhancers Primary neutrophils fromperipheralblood blood
24 chr1:186808400-186811600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:186808400-186814600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:186808600-186809800 Weak transcription Small Intestine intestine
27 chr1:186808600-186809800 Weak transcription A549 lung
28 chr1:186808600-186810600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:186808600-186810600 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:186808600-186811600 Weak transcription Fetal Intestine Small intestine
31 chr1:186808600-186811800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:186808600-186813600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:186808600-186814400 Weak transcription GM12878-XiMat blood
34 chr1:186808600-186828200 Weak transcription Pancreas Pancrea
35 chr1:186808600-186830800 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015