Variant report

Variant	rs12737288
Chromosome Location	chr1:179487514-179487515
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11802193	0.87[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs1831180	0.87[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs1928001	0.81[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs4620484	0.87[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs4651039	0.87[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs4651040	0.88[AFR][1000 genomes]
rs4652404	0.87[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs6659378	0.87[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs6690605	0.81[EUR][1000 genomes]
rs6696896	0.85[AFR][1000 genomes]
rs6698201	0.87[AFR][1000 genomes]
rs7512551	0.81[EUR][1000 genomes]
rs964982	0.87[AFR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179486400-179499600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:179486600-179499600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:179487200-179515000	Weak transcription	Rectal Mucosa Donor 31	rectum

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links