Variant report

Variant rs12747673
Chromosome Location chr1:246592020-246592021
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:246554600-246594800 Weak transcription Right Ventricle heart
2 chr1:246580800-246598400 Weak transcription A549 lung
3 chr1:246581000-246608200 Weak transcription Aorta Aorta
4 chr1:246582000-246601600 Weak transcription Primary T cells from cord blood blood
5 chr1:246589200-246592800 Enhancers NHEK skin
6 chr1:246589200-246599200 Weak transcription H9 Cell Line embryonic stem cell
7 chr1:246589200-246602000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:246590800-246592600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:246590800-246592800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:246590800-246593000 Enhancers Osteobl bone
11 chr1:246591000-246592200 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr1:246591000-246592200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:246591000-246592200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:246591000-246592600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:246591000-246592600 Enhancers HSMM muscle
16 chr1:246591000-246592800 Enhancers Muscle Satellite Cultured Cells --
17 chr1:246591000-246592800 Enhancers NH-A brain
18 chr1:246591000-246593000 Enhancers Dnd41 blood
19 chr1:246591000-246593000 Enhancers HMEC breast
20 chr1:246591200-246592200 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr1:246591200-246592200 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr1:246591200-246592200 Enhancers HUES64 Cell Line embryonic stem cell
23 chr1:246591200-246592200 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr1:246591200-246592400 Enhancers HUES48 Cell Line embryonic stem cell
25 chr1:246591200-246592400 Enhancers HUES6 Cell Line embryonic stem cell
26 chr1:246591200-246592600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:246591200-246594800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:246591400-246592400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:246591400-246592400 Enhancers NHDF-Ad bronchial
30 chr1:246591400-246592600 Enhancers iPS-20b Cell Line embryonic stem cell
31 chr1:246591400-246593000 Enhancers HSMMtube muscle
32 chr1:246591600-246592400 Enhancers H1 Cell Line embryonic stem cell
33 chr1:246591800-246592200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:246591800-246592200 Enhancers Small Intestine intestine
35 chr1:246591800-246592200 Enhancers Stomach Mucosa stomach
36 chr1:246591800-246592200 Enhancers NHLF lung
37 chr1:246591800-246592600 Enhancers Fetal Intestine Small intestine
38 chr1:246592000-246592200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:246592000-246592200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
40 chr1:246592000-246592200 Enhancers Gastric stomach
41 chr1:246592000-246592400 Enhancers Primary T cells fromperipheralblood blood
42 chr1:246592000-246592400 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr1:246592000-246592600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:246592000-246592600 ZNF genes & repeats GM12878-XiMat blood
45 chr1:246592000-246592600 Genic enhancers K562 blood

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