The 2.0 version of rSNPBase

Variant report

Variant rs12757839
Chromosome Location chr1:171287958-171287959
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171266600-171288400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:171283400-171288000 Weak transcription Small Intestine intestine
3 chr1:171283600-171293000 Weak transcription Brain Angular Gyrus brain
4 chr1:171283600-171297800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:171283800-171288000 Weak transcription Fetal Muscle Trunk muscle
6 chr1:171283800-171288000 Weak transcription Fetal Muscle Leg muscle
7 chr1:171283800-171289000 Weak transcription Brain Cingulate Gyrus brain
8 chr1:171283800-171291000 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:171283800-171292600 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:171283800-171293000 Weak transcription Brain Substantia Nigra brain
11 chr1:171284000-171288000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:171284000-171288200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:171284000-171288200 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr1:171284000-171288400 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr1:171284000-171289000 Weak transcription Rectal Smooth Muscle rectum
16 chr1:171284000-171290200 Weak transcription Colonic Mucosa Colon
17 chr1:171284000-171291200 Weak transcription Brain Anterior Caudate brain
18 chr1:171284000-171292800 Weak transcription Psoas Muscle Psoas
19 chr1:171284000-171294600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:171284000-171295200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:171284000-171295400 Weak transcription Stomach Mucosa stomach
22 chr1:171284000-171312200 Weak transcription Brain Hippocampus Middle brain
23 chr1:171284200-171288000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:171284200-171288000 Weak transcription Primary hematopoietic stem cells blood
25 chr1:171284200-171288000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:171284200-171288000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr1:171284200-171288000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:171284200-171288000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr1:171284200-171288000 Weak transcription Left Ventricle heart
30 chr1:171284200-171288000 Weak transcription Stomach Smooth Muscle stomach
31 chr1:171284200-171288200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr1:171284200-171288200 Weak transcription Fetal Lung lung
33 chr1:171284200-171288400 Weak transcription Lung lung
34 chr1:171284200-171288600 Weak transcription Primary B cells from cord blood blood
35 chr1:171284200-171288600 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr1:171284200-171291000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:171284200-171291400 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr1:171284200-171294400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:171284200-171294600 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:171284200-171295400 Weak transcription Esophagus oesophagus
41 chr1:171284200-171295800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr1:171284200-171307400 Weak transcription Primary T cells fromperipheralblood blood
43 chr1:171284200-171313600 Weak transcription Right Ventricle heart
44 chr1:171284200-171313800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr1:171284400-171288000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr1:171284400-171288200 Weak transcription Duodenum Mucosa Duodenum
47 chr1:171284600-171288200 Weak transcription Fetal Intestine Large intestine
48 chr1:171284600-171292400 Weak transcription Primary B cells from peripheral blood blood
49 chr1:171284800-171288000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:171284800-171288600 Weak transcription Adipose Nuclei Adipose

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015