Variant report

Variant	rs12768501
Chromosome Location	chr10:4357386-4357387
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11252435	1.00[ASN][1000 genomes]
rs12783149	1.00[ASN][1000 genomes]
rs12783627	1.00[ASN][1000 genomes]
rs34045626	1.00[ASN][1000 genomes]
rs34348376	1.00[ASN][1000 genomes]
rs34448666	1.00[ASN][1000 genomes]
rs71477852	1.00[ASN][1000 genomes]
rs71477853	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv894785	chr10:4306421-4372629	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4349400-4357800	Weak transcription	Ovary	ovary
2	chr10:4349400-4357800	Weak transcription	Psoas Muscle	Psoas
3	chr10:4350800-4358600	Weak transcription	Right Atrium	heart
4	chr10:4352800-4357400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr10:4352800-4357600	Weak transcription	Brain Germinal Matrix	brain
6	chr10:4353600-4358600	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr10:4353800-4357400	Weak transcription	Fetal Heart	heart
8	chr10:4354400-4357600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr10:4355600-4358000	Enhancers	Fetal Brain Male	brain
10	chr10:4355800-4359800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr10:4357000-4357600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr10:4357000-4357800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr10:4357000-4360600	Enhancers	Fetal Lung	lung
14	chr10:4357200-4357600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
15	chr10:4357200-4359000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr10:4357200-4359000	Enhancers	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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