The 2.0 version of rSNPBase

Variant report

Variant rs12788845
Chromosome Location chr11:72760696-72760697
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72724400-72761000 Weak transcription HSMM muscle
2 chr11:72739400-72765800 Weak transcription Spleen Spleen
3 chr11:72740000-72771800 Weak transcription Fetal Stomach stomach
4 chr11:72741400-72765000 Weak transcription Fetal Heart heart
5 chr11:72745600-72761000 Weak transcription Brain Cingulate Gyrus brain
6 chr11:72746600-72824600 Weak transcription Thymus Thymus
7 chr11:72750600-72765800 Weak transcription Ovary ovary
8 chr11:72758400-72773000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr11:72759400-72765800 Weak transcription HepG2 liver
10 chr11:72759400-72772000 Weak transcription Fetal Intestine Small intestine
11 chr11:72759600-72761600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr11:72759600-72764000 Enhancers Primary B cells from peripheral blood blood
13 chr11:72759600-72771000 Weak transcription Brain Hippocampus Middle brain
14 chr11:72759600-72771000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr11:72759800-72761000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr11:72759800-72761000 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr11:72759800-72761400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr11:72759800-72761800 Enhancers Primary monocytes fromperipheralblood blood
19 chr11:72759800-72763600 Enhancers Primary B cells from cord blood blood
20 chr11:72759800-72765000 Weak transcription Fetal Lung lung
21 chr11:72759800-72765600 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr11:72759800-72765800 Weak transcription Left Ventricle heart
23 chr11:72759800-72765800 Weak transcription Small Intestine intestine
24 chr11:72759800-72771400 Weak transcription HUVEC blood vessel
25 chr11:72759800-72771600 Weak transcription Fetal Thymus thymus
26 chr11:72759800-72771800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr11:72759800-72772000 Weak transcription Aorta Aorta
28 chr11:72759800-72772000 Weak transcription Pancreas Pancrea
29 chr11:72759800-72772200 Weak transcription Brain Substantia Nigra brain
30 chr11:72759800-72788400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr11:72760000-72762000 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr11:72760000-72768200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr11:72760000-72772000 Weak transcription Primary T cells from cord blood blood
34 chr11:72760000-72772200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr11:72760200-72761000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr11:72760200-72762200 Weak transcription Brain Anterior Caudate brain
37 chr11:72760200-72765000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr11:72760400-72760800 Enhancers GM12878-XiMat blood
39 chr11:72760400-72761200 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr11:72760400-72761200 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr11:72760400-72762000 Enhancers Monocytes-CD14+_RO01746 blood
42 chr11:72760400-72765800 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr11:72760600-72760800 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015