Variant report

Variant	rs12803589
Chromosome Location	chr11:72567167-72567168
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:72564714..72567468-chr11:72568499..72570676,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs12788845	1.00[AFR][1000 genomes]
rs12808517	1.00[LWK][hapmap]
rs35753869	1.00[AFR][1000 genomes]
rs4944804	1.00[LWK][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3394774	chr11:72320884-72694077	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12803589	MYEOV	cis	parietal	SCAN

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72540200-72616600	Strong transcription	Primary B cells from peripheral blood	blood
2	chr11:72540600-72589800	Strong transcription	Primary B cells from cord blood	blood
3	chr11:72543200-72614800	Weak transcription	Psoas Muscle	Psoas
4	chr11:72543400-72603000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr11:72550000-72600400	Weak transcription	Pancreas	Pancrea
6	chr11:72552200-72575400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr11:72552200-72580400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr11:72552400-72597400	Weak transcription	HMEC	breast
9	chr11:72552800-72578000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr11:72553600-72576000	Weak transcription	NHEK	skin
11	chr11:72554400-72567200	Weak transcription	Brain Substantia Nigra	brain
12	chr11:72554400-72574200	Weak transcription	Aorta	Aorta
13	chr11:72554400-72576000	Weak transcription	Brain Cingulate Gyrus	brain
14	chr11:72554600-72567600	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr11:72554600-72567800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr11:72554600-72568000	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr11:72554600-72570600	Weak transcription	Colonic Mucosa	Colon
18	chr11:72554600-72577000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr11:72554600-72577800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr11:72554600-72580400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
21	chr11:72554600-72595800	Weak transcription	Rectal Mucosa Donor 31	rectum
22	chr11:72554600-72596600	Weak transcription	Fetal Brain Female	brain
23	chr11:72554800-72567200	Weak transcription	Colon Smooth Muscle	Colon
24	chr11:72554800-72578000	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr11:72554800-72578200	Weak transcription	Duodenum Mucosa	Duodenum
26	chr11:72555400-72568000	Weak transcription	NHLF	lung
27	chr11:72555600-72567200	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr11:72555600-72567600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr11:72555600-72567800	Weak transcription	Fetal Brain Male	brain
30	chr11:72555600-72575200	Weak transcription	Right Ventricle	heart
31	chr11:72555600-72586400	Weak transcription	Sigmoid Colon	Sigmoid Colon
32	chr11:72555800-72574000	Weak transcription	Left Ventricle	heart
33	chr11:72555800-72580600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
34	chr11:72555800-72595600	Weak transcription	Thymus	Thymus
35	chr11:72556000-72586400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr11:72556200-72572800	Weak transcription	Cortex derived primary cultured neurospheres	brain
37	chr11:72556200-72576600	Weak transcription	Fetal Kidney	kidney
38	chr11:72556400-72575200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr11:72556600-72576400	Weak transcription	K562	blood
40	chr11:72556800-72567200	Weak transcription	NHDF-Ad	bronchial
41	chr11:72556800-72596600	Weak transcription	Spleen	Spleen
42	chr11:72557000-72567200	Weak transcription	Fetal Lung	lung
43	chr11:72557000-72567200	Weak transcription	Ovary	ovary
44	chr11:72557000-72569000	Weak transcription	Primary T cells from cord blood	blood
45	chr11:72557000-72575200	Weak transcription	Fetal Muscle Trunk	muscle
46	chr11:72557600-72577800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr11:72557600-72595600	Weak transcription	Lung	lung
48	chr11:72558400-72567200	Weak transcription	Brain Hippocampus Middle	brain
49	chr11:72558400-72570600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr11:72558600-72575800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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