Variant report

Variant rs12792666
Chromosome Location chr11:3915880-3915881
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:3899200-3926200 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr11:3900000-3916000 Weak transcription Spleen Spleen
3 chr11:3902200-3916400 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr11:3902200-3916400 Weak transcription Stomach Smooth Muscle stomach
5 chr11:3902400-3916400 Weak transcription Fetal Intestine Small intestine
6 chr11:3902400-3923800 Weak transcription Gastric stomach
7 chr11:3907400-3923600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr11:3907600-3922600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr11:3911200-3916800 Enhancers Dnd41 blood
10 chr11:3911400-3916400 Weak transcription Fetal Lung lung
11 chr11:3912600-3916800 Enhancers Skeletal Muscle Male skeletal muscle
12 chr11:3913000-3916000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr11:3913000-3916800 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr11:3913000-3916800 Enhancers Primary T helper cells fromperipheralblood blood
15 chr11:3913000-3916800 Enhancers Skeletal Muscle Female skeletal muscle
16 chr11:3913400-3918800 Enhancers Primary monocytes fromperipheralblood blood
17 chr11:3913600-3916600 Enhancers Sigmoid Colon Sigmoid Colon
18 chr11:3913800-3917000 Enhancers Primary T helper cells PMA-I stimulated --
19 chr11:3913800-3917800 Weak transcription Brain Inferior Temporal Lobe brain
20 chr11:3914000-3916600 Enhancers Primary Natural Killer cells fromperipheralblood blood
21 chr11:3914000-3916600 Enhancers Placenta Placenta
22 chr11:3914000-3918000 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr11:3914200-3916000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr11:3914200-3916000 Flanking Active TSS GM12878-XiMat blood
25 chr11:3914200-3916400 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr11:3914200-3916600 Enhancers Primary hematopoietic stem cells blood
27 chr11:3914200-3916600 Enhancers Primary T killer memory cells from peripheral blood blood
28 chr11:3914200-3917000 Enhancers Liver Liver
29 chr11:3914400-3916600 Enhancers Primary T regulatory cells fromperipheralblood blood
30 chr11:3914400-3916600 Enhancers Primary mononuclear cells fromperipheralblood Blood
31 chr11:3914400-3916800 Enhancers A549 lung
32 chr11:3914400-3916800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
33 chr11:3914600-3916000 Flanking Active TSS Primary B cells from cord blood blood
34 chr11:3914600-3916000 Enhancers Thymus Thymus
35 chr11:3914600-3916600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr11:3914600-3916600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr11:3914600-3916600 Enhancers Fetal Thymus thymus
38 chr11:3914600-3916600 Enhancers Pancreas Pancrea
39 chr11:3914600-3916600 Enhancers Rectal Mucosa Donor 29 rectum
40 chr11:3914600-3916600 Enhancers NHDF-Ad bronchial
41 chr11:3914600-3916600 Enhancers Osteobl bone
42 chr11:3914800-3916200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
43 chr11:3914800-3916600 Enhancers Primary T cells fromperipheralblood blood
44 chr11:3914800-3916800 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr11:3915000-3916000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr11:3915000-3916600 Enhancers Adipose Nuclei Adipose
47 chr11:3915000-3916600 Enhancers Fetal Muscle Leg muscle
48 chr11:3915200-3916000 Enhancers Muscle Satellite Cultured Cells --
49 chr11:3915200-3916000 Enhancers Colonic Mucosa Colon
50 chr11:3915200-3916600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived

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