Variant report

Variant	rs12801172
Chromosome Location	chr11:64646034-64646035
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:623)
CpG islands
(count:61)
Chromatin interactive
region (count:59)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:623 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr11:64645366-64646911	ECC-1	luminal epithelium:	n/a	n/a
2	RELA	chr11:64645772-64646606	GM12892	blood:	n/a	n/a
3	CTCF	chr11:64646000-64646150	HL-60	blood:	n/a	chr11:64646077-64646093
4	RAD21	chr11:64645696-64646657	IMR90	lung:	n/a	n/a
5	E2F6	chr11:64645503-64646658	K562	blood:	n/a	chr11:64645837-64645852 chr11:64645504-64645513 chr11:64646050-64646059
6	NRF1	chr11:64645893-64646276	K562	blood:	n/a	chr11:64646049-64646063 chr11:64646049-64646058 chr11:64646048-64646059 chr11:64646049-64646060 chr11:64646046-64646060
7	NFATC1	chr11:64645834-64646566	GM12878	blood:	n/a	n/a
8	CEBPB	chr11:64646010-64646495	Hela-S3	cervix:	n/a	n/a
9	POLR2A	chr11:64645919-64646426	HepG2	liver:	n/a	n/a
10	POLR2A	chr11:64645536-64647176	HL-60	blood:	n/a	n/a
11	CUX1	chr11:64645971-64647098	GM12878	blood:	n/a	n/a
12	NRF1	chr11:64645877-64646258	H1-hESC	embryonic stem cell:	n/a	chr11:64646049-64646063 chr11:64646049-64646058 chr11:64646048-64646059 chr11:64646049-64646060 chr11:64646046-64646060
13	TAF1	chr11:64645463-64646622	HepG2	liver:	n/a	n/a
14	RAD21	chr11:64645725-64646309	H1-hESC	embryonic stem cell:	n/a	n/a
15	THAP1	chr11:64645641-64646269	K562	blood:	n/a	n/a
16	REST	chr11:64645892-64646211	GM12878	blood:	n/a	n/a
17	CTCF	chr11:64646000-64646150	GM12870	blood:	n/a	chr11:64646077-64646093
18	ZBTB33	chr11:64645970-64646535	K562	blood:	n/a	chr11:64646263-64646278
19	REST	chr11:64645977-64646177	GM12878	blood:	n/a	n/a
20	TBP	chr11:64645883-64646983	HepG2	liver:	n/a	n/a
21	CTCF	chr11:64645980-64646130	HFF	foreskin:	n/a	chr11:64646077-64646093
22	CTCF	chr11:64645888-64646205	HepG2	liver:	n/a	chr11:64646077-64646093
23	WRNIP1	chr11:64643992-64646466	GM12878	blood:	n/a	n/a
24	CTCF	chr11:64646000-64646150	NHEK	skin:	n/a	chr11:64646077-64646093
25	YY1	chr11:64645974-64646791	K562	blood:	n/a	n/a
26	POU2F2	chr11:64645828-64646201	GM12878	blood:	n/a	n/a
27	POLR2A	chr11:64645761-64646751	HepG2	liver:	n/a	n/a
28	RELA	chr11:64645796-64646558	GM18526	blood:	n/a	n/a
29	TCF7L2	chr11:64645870-64646166	PANC-1	pancreas:	n/a	n/a
30	MAX	chr11:64645323-64646944	HepG2	liver:	n/a	n/a
31	RAD21	chr11:64645826-64646302	H1-hESC	embryonic stem cell:	n/a	n/a
32	POLR2A	chr11:64645829-64646928	MCF10A-Er-Src	breast:	n/a	n/a
33	BHLHE40	chr11:64645790-64647065	GM12878	blood:	n/a	n/a
34	BACH1	chr11:64645633-64646489	H1-hESC	embryonic stem cell:	n/a	n/a
35	TAF1	chr11:64645840-64646570	GM12891	blood:	n/a	n/a
36	TCF12	chr11:64645794-64646710	ECC-1	luminal epithelium:	n/a	n/a
37	HA-E2F1	chr11:64645721-64646904	MCF-7	breast:	n/a	chr11:64646050-64646059
38	POLR2A	chr11:64645802-64647273	K562	blood:	n/a	n/a
39	CTCF	chr11:64645984-64646206	Medullo	brain:	n/a	chr11:64646077-64646093
40	RELA	chr11:64645778-64647276	GM12891	blood:	n/a	chr11:64646925-64646934 chr11:64646925-64646934
41	MAZ	chr11:64645884-64646501	HepG2	liver:	n/a	n/a
42	UBTF	chr11:64645526-64646776	K562	blood:	n/a	n/a
43	SP4	chr11:64645938-64646419	H1-hESC	embryonic stem cell:	n/a	chr11:64646161-64646172 chr11:64646205-64646216
44	REST	chr11:64645604-64646855	A549	lung:	n/a	n/a
45	STAT1	chr11:64645745-64646572	GM12878	blood:	n/a	n/a
46	CTCF	chr11:64645960-64646110	HRPEpiC	eye:	n/a	chr11:64646077-64646093
47	CTCF	chr11:64645541-64646399	K562	blood:	n/a	chr11:64646077-64646093
48	JUND	chr11:64645781-64646767	MCF-7	breast:	n/a	n/a
49	HCFC1	chr11:64645910-64646586	K562	blood:	n/a	n/a
50	POU2F2	chr11:64645803-64646536	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:64645999-64646049	HL-60	blood:	n/a
2	chr11:64645999-64646049	HCPEpiC	choroid plexus:	n/a
3	chr11:64645999-64646049	GM12891	blood:	n/a
4	chr11:64645999-64646049	SAEC	small airway:	n/a
5	chr11:64645999-64646049	HCF	heart:	n/a
6	chr11:64645999-64646049	GM12892	blood:	n/a
7	chr11:64645999-64646049	Hela-S3	cervix:	n/a
8	chr11:64645999-64646049	Hepatocyte	liver:	n/a
9	chr11:64645999-64646049	ProgFib	skin:	n/a
10	chr11:64645999-64646049	HEK293	kidney:	embryo
11	chr11:64645999-64646049	U87	brain:	n/a
12	chr11:64645999-64646049	HRCEpiC	kidney:	n/a
13	chr11:64645999-64646049	SK-N-SH	brain:	n/a
14	chr11:64645999-64646049	NHDF-neo	bronchial:	n/a
15	chr11:64645999-64646049	AG09319	gingival:	n/a
16	chr11:64645999-64646049	AoSMC	blood vessel:	n/a
17	chr11:64645999-64646049	HPAEpiC	pulmonary alveolar:	n/a
18	chr11:64645999-64646049	A549	lung:	n/a
19	chr11:64645999-64646049	HCM	heart:	n/a
20	chr11:64645999-64646049	HNPCEpiC	eye:	n/a
21	chr11:64645999-64646049	NH-A	brain:	n/a
22	chr11:64645999-64646049	HMEC	breast:	n/a
23	chr11:64645999-64646049	H1-hESC	embryonic stem cell:	embryo
24	chr11:64645999-64646049	AG04449	skin:	fetal
25	chr11:64645999-64646049	PANC-1	pancreas:	n/a
26	chr11:64645999-64646049	SKMC	muscle:	n/a
27	chr11:64645999-64646049	GM19239	blood:	n/a
28	chr11:64645999-64646049	AG04450	lung:	fetal
29	chr11:64645999-64646049	BJ	skin:	n/a
30	chr11:64645999-64646049	ECC-1	luminal epithelium:	n/a
31	chr11:64645999-64646049	BE2_C	brain:	n/a
32	chr11:64645999-64646049	HRE	kidney:	n/a
33	chr11:64645999-64646049	AG10803	skin:	n/a
34	chr11:64645999-64646049	MCF-7	breast:	n/a
35	chr11:64645999-64646049	LNCaP	prostate:	n/a
36	chr11:64645999-64646049	HUVEC	blood vessel:	n/a
37	chr11:64645999-64646049	Caco-2	colon:	n/a
38	chr11:64645999-64646049	HAEpiC	amniotic membrane:	n/a
39	chr11:64645999-64646049	NB4	blood:	n/a
40	chr11:64645999-64646049	NT2-D1	testis:	n/a
41	chr11:64645999-64646049	IMR90	lung:	fetal
42	chr11:64645999-64646049	ovcar-3	ovarian:	n/a
43	chr11:64645999-64646049	PFSK-1	brain:	n/a
44	chr11:64645999-64646049	HEEpiC	esophagus:	n/a
45	chr11:64645999-64646049	GM06990	blood:	n/a
46	chr11:64645999-64646049	PrEC	prostate:	n/a
47	chr11:64645999-64646049	MCF10A-Er-Src	breast:	n/a
48	chr11:64645999-64646049	SK-N-MC	brain:	n/a
49	chr11:64645999-64646049	HepG2	liver:	n/a
50	chr11:64645999-64646049	NHBE	bronchial:	n/a

(count:59 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:64645775..64646467-chr17:73150096..73150665,2	Hela-S3	cervix:
2	chr11:64645762..64646606-chr22:38239708..38240538,2	NB4	blood:
3	chr11:64644496..64646920-chr11:64764507..64767051,3	K562	blood:
4	chr11:64576838..64579724-chr11:64644602..64648695,4	K562	blood:
5	chr11:64643787..64646984-chr11:64875593..64882466,11	MCF-7	breast:
6	chr11:64645037..64647722-chr11:64889185..64892415,3	MCF-7	breast:
7	chr11:64644179..64646943-chr11:64683100..64687957,8	MCF-7	breast:
8	chr11:64645458..64648042-chr11:64679788..64682013,2	MCF-7	breast:
9	chr11:64645500..64648132-chr11:64701780..64703587,2	MCF-7	breast:
10	chr1:28975071..28975739-chr11:64645551..64646275,2	Hela-S3	cervix:
11	chr11:64566980..64568493-chr11:64644627..64647594,2	MCF-7	breast:
12	chr11:64506827..64509728-chr11:64644773..64647136,2	K562	blood:
13	chr11:64489296..64491902-chr11:64644473..64646300,2	MCF-7	breast:
14	chr1:149223511..149224309-chr11:64645771..64646505,2	Hela-S3	cervix:
15	chr10:6244886..6245402-chr11:64645653..64646532,2	Hela-S3	cervix:
16	chr11:64645266..64647348-chr11:64764267..64766007,3	K562	blood:
17	chr11:64644851..64646758-chr11:64889703..64891986,3	K562	blood:
18	chr11:64644621..64647085-chr11:64869842..64873650,4	MCF-7	breast:
19	chr11:64643788..64647961-chr11:64848883..64851896,4	K562	blood:
20	chr11:64645627..64646423-chr17:56736436..56736984,2	MCF-7	breast:
21	chr11:64644806..64648507-chr11:64877927..64882201,4	MCF-7	breast:
22	chr11:64643878..64648186-chr11:64793107..64797470,5	K562	blood:
23	chr11:64644520..64646273-chr11:64683342..64685362,3	MCF-7	breast:
24	chr11:64598378..64602131-chr11:64643786..64647178,3	K562	blood:
25	chr11:64568225..64570801-chr11:64644714..64647592,2	MCF-7	breast:
26	chr11:64544833..64546350-chr11:64643462..64646283,2	K562	blood:
27	chr11:64578009..64579724-chr11:64644602..64647037,2	K562	blood:
28	chr11:64543733..64546227-chr11:64645757..64648257,3	K562	blood:
29	chr11:64643590..64647956-chr11:64883297..64887661,6	MCF-7	breast:
30	chr11:64643435..64646351-chr11:64890486..64893627,3	K562	blood:
31	chr11:64644503..64648099-chr11:64683052..64686363,9	K562	blood:
32	chr11:61100298..61100835-chr11:64645876..64646567,2	MCF-7	breast:
33	chr11:62494690..62495620-chr11:64645368..64646318,2	Hela-S3	cervix:
34	chr11:64644475..64647391-chr11:64946794..64949864,4	K562	blood:
35	chr11:64644648..64646149-chr11:64852476..64854664,2	K562	blood:
36	chr11:64643973..64646390-chr11:64783747..64786510,2	MCF-7	breast:
37	chr11:64645740..64646489-chr2:171785407..171786208,2	HCT-116	colon:
38	chr11:64644499..64647040-chr17:57916781..57919732,2	MCF-7	breast:
39	chr11:64642261..64647543-chr11:64882719..64886329,5	MCF-7	breast:
40	chr11:64642970..64646207-chr11:64900095..64903878,3	K562	blood:
41	chr11:64645804..64646473-chr2:24163389..24164133,2	Hela-S3	cervix:
42	chr11:64644520..64646761-chr11:64879281..64881959,2	K562	blood:
43	chr11:64645160..64647408-chr11:65080658..65083337,2	MCF-7	breast:
44	chr11:64644921..64647626-chr11:64948017..64950319,4	K562	blood:
45	chr11:64645580..64646560-chrX:24167900..24168635,2	Hela-S3	cervix:
46	chr11:64568638..64571349-chr11:64644530..64646635,3	MCF-7	breast:
47	chr11:64645625..64647922-chr11:64900749..64903645,2	MCF-7	breast:
48	chr11:64645854..64647856-chr11:64806233..64808621,2	K562	blood:
49	chr11:64644663..64647408-chr11:64807363..64809566,4	MCF-7	breast:
50	chr11:64644628..64647764-chr11:64688767..64693294,4	K562	blood:

No data

Variant related genes	Relation type
EHD1	TF binding region
ENSG00000230835	TF binding region
EHD1	CpG island
ENSG00000230835	CpG island
ENSG00000149735	Chromatin interaction
ENSG00000202077	Chromatin interaction
ENSG00000234857	Chromatin interaction
ENSG00000214753	Chromatin interaction
ENSG00000171219	Chromatin interaction
ENSG00000207945	Chromatin interaction
ENSG00000168061	Chromatin interaction
ENSG00000149809	Chromatin interaction
ENSG00000273003	Chromatin interaction
ENSG00000014216	Chromatin interaction
ENSG00000149806	Chromatin interaction
ENSG00000263069	Chromatin interaction
ENSG00000149792	Chromatin interaction
ENSG00000255173	Chromatin interaction
ENSG00000152348	Chromatin interaction
ENSG00000115806	Chromatin interaction
ENSG00000068971	Chromatin interaction
ENSG00000254614	Chromatin interaction
ENSG00000168066	Chromatin interaction
ENSG00000173818	Chromatin interaction
ENSG00000168067	Chromatin interaction
ENSG00000149476	Chromatin interaction
ENSG00000199004	Chromatin interaction
ENSG00000270775	Chromatin interaction
ENSG00000149823	Chromatin interaction
ENSG00000162222	Chromatin interaction
ENSG00000005889	Chromatin interaction
ENSG00000189159	Chromatin interaction
ENSG00000133895	Chromatin interaction
ENSG00000168062	Chromatin interaction
ENSG00000269038	Chromatin interaction
ENSG00000170525	Chromatin interaction
ENSG00000162298	Chromatin interaction
ENSG00000167986	Chromatin interaction
ENSG00000110076	Chromatin interaction
ENSG00000254501	Chromatin interaction
ENSG00000100124	Chromatin interaction
ENSG00000149798	Chromatin interaction
ENSG00000068831	Chromatin interaction
ENSG00000110025	Chromatin interaction
ENSG00000187066	Chromatin interaction
ENSG00000270103	Chromatin interaction
ENSG00000146670	Chromatin interaction
ENSG00000213465	Chromatin interaction
ENSG00000173960	Chromatin interaction
ENSG00000110046	Chromatin interaction
ENSG00000162300	Chromatin interaction
ENSG00000174276	Chromatin interaction
ENSG00000206737	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10897533	0.90[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs1211284	0.90[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12573	0.81[JPT][hapmap];0.89[ASN][1000 genomes]
rs17146413	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2007521	0.92[ASN][1000 genomes]
rs2077026	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3741391	0.90[ASN][1000 genomes]
rs3893108	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3936999	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap]
rs3937000	1.00[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs41381745	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4930280	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4930281	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4930685	0.90[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs57851864	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs589556	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs602347	0.95[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs607569	0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs620066	0.86[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs621608	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs622611	0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs635722	0.94[ASN][1000 genomes]
rs641623	0.98[ASN][1000 genomes]
rs649208	0.88[ASN][1000 genomes]
rs653225	0.91[ASN][1000 genomes]
rs654580	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs656982	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7126744	0.94[ASN][1000 genomes]
rs7926812	0.94[ASN][1000 genomes]
rs7927560	0.90[ASN][1000 genomes]
rs7943238	0.88[ASN][1000 genomes]
rs7944276	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7949887	0.80[CHB][hapmap];0.80[JPT][hapmap];0.82[ASN][1000 genomes]
rs7952306	0.93[ASN][1000 genomes]
rs7952567	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv528506	chr11:64345448-64701030	Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1075 gene(s)	inside rSNPs	diseases
2	nsv897695	chr11:64357072-64701030	Weak transcription Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1075 gene(s)	inside rSNPs	diseases
3	nsv897700	chr11:64447420-64701030	Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1071 gene(s)	inside rSNPs	diseases
4	nsv897704	chr11:64584987-64701030	Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1028 gene(s)	inside rSNPs	diseases
5	nsv897705	chr11:64591679-64701030	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1028 gene(s)	inside rSNPs	diseases
6	nsv897706	chr11:64591679-64721908	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1028 gene(s)	inside rSNPs	diseases
7	nsv897707	chr11:64600002-64701030	Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1028 gene(s)	inside rSNPs	diseases
8	nsv897708	chr11:64602757-64695271	Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1028 gene(s)	inside rSNPs	diseases
9	nsv360	chr11:64632395-64659636	Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	1003 gene(s)	inside rSNPs	diseases
10	nsv526181	chr11:64638041-65257329	Flanking Active TSS Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1539 gene(s)	inside rSNPs	diseases
11	nsv555208	chr11:64645119-64771179	Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1029 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64642600-64646400	Active TSS	HSMMtube	muscle
2	chr11:64642600-64646800	Active TSS	GM12878-XiMat	blood
3	chr11:64643400-64647000	Active TSS	Aorta	Aorta
4	chr11:64643600-64646600	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
5	chr11:64643600-64646600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr11:64643800-64646600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
7	chr11:64643800-64647200	Active TSS	Pancreatic Islets	Pancreatic Islet
8	chr11:64644000-64646400	Active TSS	Primary T killer memory cells from peripheral blood	blood
9	chr11:64644000-64646800	Active TSS	Small Intestine	intestine
10	chr11:64644200-64646600	Active TSS	Primary T helper naive cells from peripheral blood	blood
11	chr11:64644200-64646600	Active TSS	NHEK	skin
12	chr11:64644200-64646800	Active TSS	Sigmoid Colon	Sigmoid Colon
13	chr11:64644200-64646800	Active TSS	NHDF-Ad	bronchial
14	chr11:64644200-64647000	Active TSS	Duodenum Smooth Muscle	Duodenum
15	chr11:64644400-64646400	Active TSS	Placenta Amnion	Placenta Amnion
16	chr11:64644400-64646600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr11:64644400-64646600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr11:64644400-64646600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr11:64644400-64646600	Active TSS	HMEC	breast
20	chr11:64644400-64646800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr11:64644400-64646800	Active TSS	Fetal Intestine Large	intestine
22	chr11:64644400-64646800	Active TSS	NHLF	lung
23	chr11:64644400-64647000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr11:64644400-64647000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr11:64644400-64647000	Active TSS	Colon Smooth Muscle	Colon
26	chr11:64644600-64646600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr11:64644600-64646600	Active TSS	Primary T killer naive cells fromperipheralblood	blood
28	chr11:64644600-64646800	Active TSS	A549	lung
29	chr11:64644600-64646800	Active TSS	HSMM	muscle
30	chr11:64644800-64646600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr11:64644800-64646600	Active TSS	Breast Myoepithelial Primary Cells	Breast
32	chr11:64644800-64646600	Bivalent/Poised TSS	HepG2	liver
33	chr11:64644800-64646800	Active TSS	Fetal Heart	heart
34	chr11:64644800-64646800	Active TSS	Gastric	stomach
35	chr11:64644800-64646800	Active TSS	Lung	lung
36	chr11:64644800-64646800	Active TSS	Stomach Mucosa	stomach
37	chr11:64644800-64647000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
38	chr11:64644800-64647000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr11:64644800-64647000	Active TSS	Left Ventricle	heart
40	chr11:64644800-64647400	Active TSS	H9 Cell Line	embryonic stem cell
41	chr11:64645000-64646400	Active TSS	Primary B cells from peripheral blood	blood
42	chr11:64645000-64646400	Active TSS	HUVEC	blood vessel
43	chr11:64645000-64646400	Active TSS	NH-A	brain
44	chr11:64645000-64646400	Active TSS	Osteobl	bone
45	chr11:64645000-64646600	Active TSS	Primary T cells fromperipheralblood	blood
46	chr11:64645000-64646600	Active TSS	Rectal Smooth Muscle	rectum
47	chr11:64645000-64646600	Active TSS	Right Ventricle	heart
48	chr11:64645000-64646800	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr11:64645000-64647000	Active TSS	Ovary	ovary
50	chr11:64645200-64646400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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