Variant report

Variant	rs12805207
Chromosome Location	chr11:121224378-121224379
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12277757	0.81[ASN][1000 genomes]
rs12294794	0.81[ASN][1000 genomes]
rs12295762	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17125182	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17125207	0.81[ASN][1000 genomes]
rs17245928	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17245949	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2043107	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs297487	0.89[EUR][1000 genomes]
rs297500	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs297502	1.00[AMR][1000 genomes]
rs34874617	0.94[ASN][1000 genomes]
rs35003739	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs35015954	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35463460	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs71486378	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs71486379	1.00[AMR][1000 genomes]
rs733435	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs747220	0.94[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121219600-121225400	Weak transcription	Stomach Mucosa	stomach
2	chr11:121220400-121225200	Enhancers	Brain Germinal Matrix	brain
3	chr11:121221600-121228200	Weak transcription	Pancreas	Pancrea
4	chr11:121222000-121224600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr11:121222600-121224600	Enhancers	Fetal Brain Male	brain
6	chr11:121223800-121225600	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr11:121224000-121224400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr11:121224000-121225200	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr11:121224000-121228200	Weak transcription	Left Ventricle	heart
10	chr11:121224000-121230800	Weak transcription	Right Atrium	heart
11	chr11:121224200-121236000	Weak transcription	Fetal Brain Female	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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