Variant report

Variant rs12806573
Chromosome Location chr11:33799826-33799827
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:33797200-33800000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr11:33797200-33800800 Weak transcription Placenta Amnion Placenta Amnion
3 chr11:33797200-33801600 Weak transcription Aorta Aorta
4 chr11:33797200-33801600 Weak transcription Ovary ovary
5 chr11:33797400-33800000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr11:33797600-33801400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr11:33797600-33801400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:33797800-33800000 Weak transcription Muscle Satellite Cultured Cells --
9 chr11:33798000-33800600 Bivalent Enhancer Primary T cells fromperipheralblood blood
10 chr11:33798200-33800200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
11 chr11:33798200-33800400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr11:33798400-33802000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr11:33798600-33800400 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr11:33799200-33800200 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr11:33799200-33800400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
16 chr11:33799200-33800800 Enhancers H1 Cell Line embryonic stem cell
17 chr11:33799400-33800000 Enhancers HUES48 Cell Line embryonic stem cell
18 chr11:33799400-33800400 Bivalent Enhancer Fetal Thymus thymus
19 chr11:33799400-33800600 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr11:33799400-33801800 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr11:33799400-33802000 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr11:33799600-33800000 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
23 chr11:33799600-33800000 Enhancers NH-A brain
24 chr11:33799600-33800400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr11:33799600-33800400 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr11:33799600-33800600 Bivalent Enhancer H9 Derived Neuron Cultured Cells ES cell derived
27 chr11:33799600-33800600 Bivalent Enhancer Fetal Muscle Leg muscle
28 chr11:33799600-33800800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr11:33799600-33801400 Enhancers HSMMtube muscle
30 chr11:33799600-33801400 Enhancers Osteobl bone
31 chr11:33799600-33801800 Enhancers Fetal Heart heart
32 chr11:33799600-33802000 Enhancers HUES6 Cell Line embryonic stem cell
33 chr11:33799600-33802200 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr11:33799600-33802200 Enhancers HUES64 Cell Line embryonic stem cell
35 chr11:33799600-33802200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr11:33799600-33802400 Enhancers NHLF lung
37 chr11:33799800-33800000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
38 chr11:33799800-33800000 Enhancers Fetal Brain Female brain
39 chr11:33799800-33800200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr11:33799800-33800400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:33799800-33800400 Bivalent Enhancer Fetal Muscle Trunk muscle
42 chr11:33799800-33800400 Bivalent Enhancer Fetal Stomach stomach
43 chr11:33799800-33800400 Enhancers Right Atrium heart
44 chr11:33799800-33800400 Enhancers Right Ventricle heart
45 chr11:33799800-33800600 Flanking Active TSS Brain Germinal Matrix brain
46 chr11:33799800-33800600 Bivalent Enhancer Fetal Lung lung
47 chr11:33799800-33800600 Bivalent Enhancer Thymus Thymus
48 chr11:33799800-33800800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr11:33799800-33801200 Enhancers Cortex derived primary cultured neurospheres brain
50 chr11:33799800-33801200 Enhancers Fetal Brain Male brain

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