Variant report

Variant	rs12807177
Chromosome Location	chr11:45799373-45799374
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11038662	0.85[ASN][1000 genomes]
rs12790201	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12802077	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12805705	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34462032	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34571612	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34764250	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35624205	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35730296	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35795927	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35882101	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35997126	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4589265	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45793600-45802200	Weak transcription	Spleen	Spleen
2	chr11:45797600-45799600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr11:45797600-45799600	Enhancers	Adipose Nuclei	Adipose
4	chr11:45798400-45799400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr11:45798400-45799600	Enhancers	NHLF	lung
6	chr11:45799000-45799400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr11:45799000-45799400	Flanking Active TSS	Liver	Liver
8	chr11:45799200-45799600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr11:45799200-45799600	Bivalent Enhancer	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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