Variant report

Variant	rs35997126
Chromosome Location	chr11:45788412-45788413
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	NR3C1	chr11:45788039-45788452	A549	lung:	n/a	chr11:45788321-45788347 chr11:45788210-45788224

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:45785983..45788422-chr11:45790928..45793070,2	K562	blood:

Variant related genes	Relation type
ENSG00000205106	TF binding region
ENSG00000205106	Chromatin interaction

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11038633	0.89[AMR][1000 genomes]
rs11038634	0.89[AMR][1000 genomes]
rs11038645	1.00[ASN][1000 genomes]
rs11038646	1.00[ASN][1000 genomes]
rs11038647	0.87[ASN][1000 genomes]
rs11038662	0.81[ASN][1000 genomes]
rs12286489	0.99[ASN][1000 genomes]
rs12291983	0.96[ASN][1000 genomes]
rs12295599	0.96[ASN][1000 genomes]
rs12790201	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12802077	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12805705	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12807177	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1530634	0.93[ASN][1000 genomes]
rs16938361	0.96[ASN][1000 genomes]
rs2593739	0.90[ASN][1000 genomes]
rs2666922	0.97[ASN][1000 genomes]
rs34061867	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs34462032	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34571612	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34764250	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35133667	0.96[ASN][1000 genomes]
rs35624205	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35730296	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35795927	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35882101	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3740704	0.93[ASN][1000 genomes]
rs4589265	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7937659	0.93[ASN][1000 genomes]
rs7941885	0.93[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45787200-45788800	Enhancers	Skeletal Muscle Male	skeletal muscle
2	chr11:45787200-45792400	Weak transcription	Fetal Heart	heart
3	chr11:45787400-45788600	Enhancers	Left Ventricle	heart
4	chr11:45787600-45788600	Enhancers	Right Atrium	heart
5	chr11:45787600-45788600	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr11:45787800-45792600	Weak transcription	Right Ventricle	heart
7	chr11:45788200-45788600	Enhancers	Psoas Muscle	Psoas
8	chr11:45788400-45788800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr11:45788400-45789000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr11:45788400-45792600	Weak transcription	Gastric	stomach
11	chr11:45788400-45792600	Weak transcription	Pancreas	Pancrea

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