Variant report
| Variant | rs12815488 |
|---|---|
| Chromosome Location | chr12:56441508-56441509 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56437000-56447200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr12:56437000-56472800 | Weak transcription | Right Atrium | heart |
| 3 | chr12:56437800-56450000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 4 | chr12:56438000-56442000 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr12:56438000-56442400 | Weak transcription | Fetal Brain Male | brain |
| 6 | chr12:56439400-56441800 | Weak transcription | Lung | lung |
| 7 | chr12:56439400-56441800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 8 | chr12:56439400-56442200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 9 | chr12:56439600-56443600 | Weak transcription | Adipose Nuclei | Adipose |
| 10 | chr12:56439600-56443800 | Weak transcription | NHDF-Ad | bronchial |
| 11 | chr12:56439600-56447200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 12 | chr12:56439600-56448800 | Weak transcription | HSMMtube | muscle |
| 13 | chr12:56439600-56449600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 14 | chr12:56439800-56442000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 15 | chr12:56439800-56448600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr12:56440000-56441800 | Weak transcription | Thymus | Thymus |
| 17 | chr12:56440000-56442200 | Weak transcription | Fetal Brain Female | brain |
| 18 | chr12:56440000-56445400 | Weak transcription | Placenta | Placenta |
| 19 | chr12:56440000-56448600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 20 | chr12:56440200-56441800 | Weak transcription | Spleen | Spleen |
| 21 | chr12:56440200-56442000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 22 | chr12:56440200-56446000 | Weak transcription | HSMM | muscle |
| 23 | chr12:56440400-56442000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr12:56440400-56442000 | Weak transcription | Primary B cells from cord blood | blood |
| 25 | chr12:56440400-56442000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 26 | chr12:56440400-56442000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 27 | chr12:56440400-56442000 | Weak transcription | Brain Hippocampus Middle | brain |
| 28 | chr12:56440400-56442600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 29 | chr12:56440400-56443000 | Weak transcription | Brain Germinal Matrix | brain |
| 30 | chr12:56440400-56443600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 31 | chr12:56440400-56445600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 32 | chr12:56440400-56448600 | Weak transcription | HMEC | breast |
| 33 | chr12:56440600-56448400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 34 | chr12:56440600-56448600 | Weak transcription | A549 | lung |
| 35 | chr12:56440800-56442000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 36 | chr12:56440800-56442800 | Weak transcription | Fetal Stomach | stomach |
| 37 | chr12:56440800-56444400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 38 | chr12:56440800-56454000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 39 | chr12:56440800-56455600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 40 | chr12:56441000-56443200 | Weak transcription | GM12878-XiMat | blood |
| 41 | chr12:56441000-56443800 | Weak transcription | Fetal Intestine Small | intestine |
| 42 | chr12:56441000-56445000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 43 | chr12:56441000-56446400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 44 | chr12:56441000-56448400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 45 | chr12:56441200-56442000 | Weak transcription | K562 | blood |
| 46 | chr12:56441200-56442800 | Enhancers | HepG2 | liver |
| 47 | chr12:56441200-56444200 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 48 | chr12:56441200-56448600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
