Variant report
| Variant | rs12831468 |
|---|---|
| Chromosome Location | chr12:56440010-56440011 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56437000-56447200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr12:56437000-56472800 | Weak transcription | Right Atrium | heart |
| 3 | chr12:56437200-56440800 | Weak transcription | Fetal Heart | heart |
| 4 | chr12:56437400-56440400 | Strong transcription | Primary B cells from cord blood | blood |
| 5 | chr12:56437400-56440600 | Strong transcription | Brain Angular Gyrus | brain |
| 6 | chr12:56437400-56440800 | Strong transcription | Fetal Stomach | stomach |
| 7 | chr12:56437600-56440200 | Strong transcription | Primary T helper naive cells from peripheral blood | blood |
| 8 | chr12:56437600-56440400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr12:56437600-56440400 | Strong transcription | Brain Cingulate Gyrus | brain |
| 10 | chr12:56437600-56440400 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 11 | chr12:56437600-56440600 | Strong transcription | Fetal Muscle Trunk | muscle |
| 12 | chr12:56437600-56440800 | Strong transcription | Fetal Thymus | thymus |
| 13 | chr12:56437800-56440200 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr12:56437800-56440200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 15 | chr12:56437800-56440200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 16 | chr12:56437800-56440200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 17 | chr12:56437800-56440200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 18 | chr12:56437800-56440200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 19 | chr12:56437800-56440200 | Strong transcription | Spleen | Spleen |
| 20 | chr12:56437800-56440400 | Strong transcription | Primary T cells from cord blood | blood |
| 21 | chr12:56437800-56440400 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 22 | chr12:56437800-56440400 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
| 23 | chr12:56437800-56440400 | Strong transcription | Brain Germinal Matrix | brain |
| 24 | chr12:56437800-56440400 | Strong transcription | Brain Hippocampus Middle | brain |
| 25 | chr12:56437800-56440400 | Weak transcription | Small Intestine | intestine |
| 26 | chr12:56437800-56440400 | Strong transcription | HMEC | breast |
| 27 | chr12:56437800-56440600 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 28 | chr12:56437800-56440600 | Strong transcription | A549 | lung |
| 29 | chr12:56437800-56440800 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 30 | chr12:56437800-56440800 | Weak transcription | Gastric | stomach |
| 31 | chr12:56437800-56450000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 32 | chr12:56438000-56440200 | Strong transcription | HSMM | muscle |
| 33 | chr12:56438000-56440400 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 34 | chr12:56438000-56440600 | Strong transcription | Duodenum Mucosa | Duodenum |
| 35 | chr12:56438000-56440800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 36 | chr12:56438000-56442000 | Weak transcription | Fetal Kidney | kidney |
| 37 | chr12:56438000-56442400 | Weak transcription | Fetal Brain Male | brain |
| 38 | chr12:56438600-56440600 | Genic enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 39 | chr12:56438800-56440800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 40 | chr12:56439000-56440400 | Strong transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 41 | chr12:56439200-56440200 | Genic enhancers | Fetal Intestine Small | intestine |
| 42 | chr12:56439200-56440800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 43 | chr12:56439200-56440800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 44 | chr12:56439200-56440800 | Weak transcription | Right Ventricle | heart |
| 45 | chr12:56439400-56440200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 46 | chr12:56439400-56440200 | Weak transcription | NHLF | lung |
| 47 | chr12:56439400-56440400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 48 | chr12:56439400-56440400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 49 | chr12:56439400-56440400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 50 | chr12:56439400-56440600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
