Variant report

Variant	rs12816796
Chromosome Location	chr12:8889097-8889098
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12582824	1.00[YRI][hapmap]
rs12820254	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1558526	1.00[YRI][hapmap]
rs34022782	1.00[AFR][1000 genomes]
rs35532123	1.00[AFR][1000 genomes]
rs71447530	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes]

Chromatin state (count:88 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:8852800-8908600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
2	chr12:8853200-8934000	Weak transcription	K562	blood
3	chr12:8862400-8894800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr12:8862400-8895000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr12:8862400-8902400	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr12:8862600-8894800	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr12:8862800-8905400	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr12:8862800-8908000	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr12:8865000-8895200	Weak transcription	Psoas Muscle	Psoas
10	chr12:8866000-8895000	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr12:8866000-8896600	Weak transcription	Brain Hippocampus Middle	brain
12	chr12:8868200-8905400	Weak transcription	Right Ventricle	heart
13	chr12:8868800-8892800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr12:8872000-8896600	Weak transcription	HUVEC	blood vessel
15	chr12:8874200-8894800	Weak transcription	HSMM	muscle
16	chr12:8874400-8892000	Weak transcription	Primary B cells from peripheral blood	blood
17	chr12:8875600-8894800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr12:8875600-8895000	Weak transcription	HSMMtube	muscle
19	chr12:8875800-8933200	Weak transcription	Fetal Kidney	kidney
20	chr12:8877600-8902600	Weak transcription	Stomach Smooth Muscle	stomach
21	chr12:8877800-8894800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr12:8877800-8904000	Weak transcription	Fetal Brain Male	brain
23	chr12:8878400-8904400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr12:8878400-8923600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr12:8878400-8937200	Weak transcription	Brain Cingulate Gyrus	brain
26	chr12:8879800-8894800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr12:8879800-8902400	Weak transcription	HUES48 Cell Line	embryonic stem cell
28	chr12:8881800-8892800	Weak transcription	Placenta	Placenta
29	chr12:8882000-8892200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr12:8882200-8890600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
31	chr12:8882200-8891800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr12:8882200-8892000	Weak transcription	Brain Germinal Matrix	brain
33	chr12:8882200-8892200	Weak transcription	Fetal Thymus	thymus
34	chr12:8882200-8895000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr12:8882200-8895000	Weak transcription	Fetal Intestine Large	intestine
36	chr12:8882200-8895000	Weak transcription	Lung	lung
37	chr12:8882200-8895200	Weak transcription	Thymus	Thymus
38	chr12:8882200-8902400	Weak transcription	H1 Cell Line	embryonic stem cell
39	chr12:8882200-8904800	Weak transcription	H9 Cell Line	embryonic stem cell
40	chr12:8882200-8938400	Weak transcription	Spleen	Spleen
41	chr12:8882200-8939400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr12:8882400-8890400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr12:8882400-8890800	Weak transcription	Fetal Intestine Small	intestine
44	chr12:8882400-8892200	Weak transcription	Fetal Muscle Leg	muscle
45	chr12:8882400-8895000	Weak transcription	Cortex derived primary cultured neurospheres	brain
46	chr12:8882400-8902600	Weak transcription	Fetal Lung	lung
47	chr12:8882400-8904200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
48	chr12:8882400-8905800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr12:8882600-8890600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr12:8882600-8894800	Weak transcription	Dnd41	blood

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