The 2.0 version of rSNPBase

Variant report

Variant rs12820254
Chromosome Location chr12:8907655-8907656
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8852800-8908600 Weak transcription Primary T helper naive cells from peripheral blood blood
2 chr12:8853200-8934000 Weak transcription K562 blood
3 chr12:8862800-8908000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr12:8875800-8933200 Weak transcription Fetal Kidney kidney
5 chr12:8878400-8923600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr12:8878400-8937200 Weak transcription Brain Cingulate Gyrus brain
7 chr12:8882200-8938400 Weak transcription Spleen Spleen
8 chr12:8882200-8939400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr12:8883400-8938800 Weak transcription Primary B cells from cord blood blood
10 chr12:8886600-8912200 Weak transcription Small Intestine intestine
11 chr12:8888800-8932000 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr12:8889200-8917400 Weak transcription Fetal Heart heart
13 chr12:8889200-8935800 Weak transcription A549 lung
14 chr12:8889200-8936600 Weak transcription Brain Angular Gyrus brain
15 chr12:8890400-8911000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr12:8890600-8937000 Weak transcription Colon Smooth Muscle Colon
17 chr12:8893800-8911000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr12:8894200-8937800 Weak transcription Esophagus oesophagus
19 chr12:8894400-8920800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:8895400-8923200 Weak transcription Placenta Amnion Placenta Amnion
21 chr12:8895400-8927600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr12:8895600-8909000 Weak transcription NHDF-Ad bronchial
23 chr12:8895600-8911200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr12:8895600-8935200 Weak transcription HMEC breast
25 chr12:8895600-8937800 Weak transcription HSMMtube muscle
26 chr12:8895600-8941200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr12:8896000-8908000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr12:8897000-8908000 Weak transcription Brain Hippocampus Middle brain
29 chr12:8897000-8931400 Weak transcription Brain Anterior Caudate brain
30 chr12:8899200-8912400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr12:8899400-8941200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr12:8901000-8912400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr12:8901400-8912400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr12:8901400-8913200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr12:8901600-8908400 Weak transcription Primary monocytes fromperipheralblood blood
36 chr12:8901800-8908400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr12:8902000-8910000 Strong transcription Fetal Muscle Trunk muscle
38 chr12:8902000-8912400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr12:8902000-8912400 Strong transcription HUES64 Cell Line embryonic stem cell
40 chr12:8902200-8923400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr12:8902400-8910800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr12:8902400-8911400 Strong transcription H1 Cell Line embryonic stem cell
43 chr12:8902400-8911800 Strong transcription HUES48 Cell Line embryonic stem cell
44 chr12:8902400-8911800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr12:8902400-8912400 Strong transcription HUES6 Cell Line embryonic stem cell
46 chr12:8902400-8912400 Strong transcription iPS-18 Cell Line embryonic stem cell
47 chr12:8902400-8912400 Strong transcription iPS-20b Cell Line embryonic stem cell
48 chr12:8902400-8912400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr12:8902400-8912400 Strong transcription Dnd41 blood
50 chr12:8902400-8912600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015