Variant report

Variant rs12817671
Chromosome Location chr12:56369224-56369225
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:56366600-56369400 Active TSS Esophagus oesophagus
2 chr12:56367000-56370000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr12:56368000-56369400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
4 chr12:56368200-56369400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
5 chr12:56368400-56369400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr12:56368400-56369400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr12:56368400-56369400 Flanking Active TSS Dnd41 blood
8 chr12:56368400-56369400 Flanking Active TSS Hela-S3 cervix
9 chr12:56368600-56369400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
10 chr12:56368600-56369400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr12:56368600-56369400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr12:56368600-56369400 Enhancers Primary monocytes fromperipheralblood blood
13 chr12:56368600-56369400 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr12:56368600-56369400 Flanking Active TSS Brain Germinal Matrix brain
15 chr12:56368600-56369400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
16 chr12:56368600-56369400 Enhancers Spleen Spleen
17 chr12:56368600-56369800 Enhancers Primary T cells fromperipheralblood blood
18 chr12:56368600-56370200 Weak transcription Stomach Mucosa stomach
19 chr12:56368600-56371000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr12:56368600-56371600 Enhancers Fetal Heart heart
21 chr12:56368600-56374200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr12:56368600-56375400 Weak transcription Lung lung
23 chr12:56368600-56383200 Weak transcription Gastric stomach
24 chr12:56368800-56369400 Enhancers Primary B cells from peripheral blood blood
25 chr12:56368800-56369400 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr12:56368800-56369400 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr12:56368800-56369400 Enhancers Pancreas Pancrea
28 chr12:56368800-56369400 Enhancers Small Intestine intestine
29 chr12:56368800-56374200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr12:56368800-56379000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr12:56369000-56369400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr12:56369000-56369400 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:56369000-56369400 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr12:56369000-56369400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
35 chr12:56369000-56369400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr12:56369000-56369400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
37 chr12:56369000-56369400 Enhancers Brain Anterior Caudate brain
38 chr12:56369000-56369400 Enhancers Brain Cingulate Gyrus brain
39 chr12:56369000-56369400 Enhancers Colonic Mucosa Colon
40 chr12:56369000-56369400 Enhancers Fetal Brain Male brain
41 chr12:56369000-56369400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
42 chr12:56369000-56369400 Genic enhancers Fetal Thymus thymus
43 chr12:56369000-56369600 Enhancers Primary B cells from cord blood blood
44 chr12:56369000-56369600 Enhancers Primary hematopoietic stem cells blood
45 chr12:56369000-56369600 Enhancers Placenta Placenta
46 chr12:56369000-56370000 Enhancers Primary T cells from cord blood blood
47 chr12:56369000-56370000 Weak transcription HSMM muscle
48 chr12:56369000-56370000 Enhancers Monocytes-CD14+_RO01746 blood
49 chr12:56369000-56370200 Weak transcription Right Atrium heart
50 chr12:56369000-56370400 Enhancers Brain Dorsolateral Prefrontal Cortex brain

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