Variant report

Variant rs71459335
Chromosome Location chr12:56436917-56436918
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:56434600-56437200 Active TSS Pancreatic Islets Pancreatic Islet
2 chr12:56434800-56437000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
3 chr12:56434800-56437000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
4 chr12:56435000-56437000 Active TSS iPS-15b Cell Line embryonic stem cell
5 chr12:56435000-56437400 Active TSS Right Ventricle heart
6 chr12:56435600-56437000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
7 chr12:56435600-56437000 Active TSS Gastric stomach
8 chr12:56435800-56437000 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
9 chr12:56435800-56437200 Flanking Active TSS Primary hematopoietic stem cells blood
10 chr12:56435800-56437600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
11 chr12:56436000-56437000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr12:56436000-56437600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
13 chr12:56436000-56437600 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
14 chr12:56436000-56437600 Transcr. at gene 5' and 3' Dnd41 blood
15 chr12:56436200-56437000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
16 chr12:56436400-56437000 Flanking Active TSS Primary B cells from cord blood blood
17 chr12:56436400-56437000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
18 chr12:56436400-56437000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
19 chr12:56436400-56437000 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
20 chr12:56436400-56437000 Flanking Active TSS Adipose Nuclei Adipose
21 chr12:56436400-56437000 Flanking Active TSS Colonic Mucosa Colon
22 chr12:56436400-56437000 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
23 chr12:56436400-56437200 Transcr. at gene 5' and 3' Fetal Lung lung
24 chr12:56436400-56437200 Flanking Active TSS Rectal Smooth Muscle rectum
25 chr12:56436400-56437400 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr12:56436400-56437400 Transcr. at gene 5' and 3' HSMM muscle
27 chr12:56436400-56437600 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr12:56436400-56437600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
29 chr12:56436400-56437800 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
30 chr12:56436400-56437800 Transcr. at gene 5' and 3' Fetal Adrenal Gland Adrenal Gland
31 chr12:56436400-56437800 Transcr. at gene 5' and 3' A549 lung
32 chr12:56436400-56437800 Transcr. at gene 5' and 3' K562 blood
33 chr12:56436400-56438000 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
34 chr12:56436400-56438000 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
35 chr12:56436400-56438000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
36 chr12:56436600-56437000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
37 chr12:56436600-56437000 Flanking Active TSS Brain Germinal Matrix brain
38 chr12:56436600-56437000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
39 chr12:56436600-56437000 Transcr. at gene 5' and 3' Brain Substantia Nigra brain
40 chr12:56436600-56437000 Transcr. at gene 5' and 3' Colon Smooth Muscle Colon
41 chr12:56436600-56437000 Transcr. at gene 5' and 3' Fetal Brain Male brain
42 chr12:56436600-56437000 Flanking Active TSS Fetal Heart heart
43 chr12:56436600-56437000 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
44 chr12:56436600-56437200 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
45 chr12:56436600-56437200 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
46 chr12:56436600-56437200 Flanking Active TSS Brain Hippocampus Middle brain
47 chr12:56436600-56437200 Flanking Active TSS Thymus Thymus
48 chr12:56436600-56437400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr12:56436600-56437400 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr12:56436600-56437400 Transcr. at gene 5' and 3' Fetal Thymus thymus

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