The 2.0 version of rSNPBase

Variant report

Variant rs12818323
Chromosome Location chr12:105426048-105426049
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:105389000-105430600 Weak transcription Hela-S3 cervix
2 chr12:105394200-105435000 Weak transcription Brain Cingulate Gyrus brain
3 chr12:105394800-105434200 Weak transcription Brain Substantia Nigra brain
4 chr12:105397400-105443200 Weak transcription H9 Cell Line embryonic stem cell
5 chr12:105407800-105430200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:105407800-105434400 Weak transcription Brain Hippocampus Middle brain
7 chr12:105408000-105434400 Weak transcription Brain Angular Gyrus brain
8 chr12:105408000-105434400 Weak transcription Brain Anterior Caudate brain
9 chr12:105409200-105446800 Weak transcription Left Ventricle heart
10 chr12:105409400-105428800 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr12:105409400-105465200 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr12:105409600-105427800 Weak transcription Primary hematopoietic stem cells blood
13 chr12:105410800-105430600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr12:105410800-105446400 Weak transcription K562 blood
15 chr12:105412400-105440400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr12:105413000-105426600 Weak transcription NHEK skin
17 chr12:105413000-105441800 Weak transcription Fetal Muscle Trunk muscle
18 chr12:105413000-105445000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr12:105413000-105476800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr12:105413200-105430600 Weak transcription Primary T cells from cord blood blood
21 chr12:105413200-105457800 Weak transcription Duodenum Mucosa Duodenum
22 chr12:105413400-105430800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr12:105414800-105447200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr12:105414800-105454000 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr12:105415000-105440400 Weak transcription Gastric stomach
26 chr12:105418600-105426800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr12:105418600-105441000 Weak transcription Pancreas Pancrea
28 chr12:105419400-105434400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr12:105419800-105426600 Weak transcription Aorta Aorta
30 chr12:105420000-105477000 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr12:105420200-105429400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr12:105420200-105441000 Weak transcription Fetal Brain Male brain
33 chr12:105420400-105434600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr12:105420400-105435000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr12:105420400-105440600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr12:105420400-105448600 Weak transcription Ovary ovary
37 chr12:105420600-105435200 Strong transcription Osteobl bone
38 chr12:105420600-105442000 Weak transcription Fetal Lung lung
39 chr12:105420600-105442000 Weak transcription Rectal Smooth Muscle rectum
40 chr12:105420600-105447000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr12:105420800-105434400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr12:105420800-105442000 Weak transcription Fetal Muscle Leg muscle
43 chr12:105421400-105427400 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr12:105421400-105432600 Strong transcription HSMMtube muscle
45 chr12:105421400-105433600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr12:105421600-105428400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr12:105422600-105430400 Weak transcription Colon Smooth Muscle Colon
48 chr12:105422600-105442800 Weak transcription Stomach Smooth Muscle stomach
49 chr12:105423200-105429200 Weak transcription Psoas Muscle Psoas
50 chr12:105423200-105459400 Weak transcription Lung lung

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Last update: Aug 31, 2015