The 2.0 version of rSNPBase

Variant report

Variant rs11112330
Chromosome Location chr12:105434467-105434468
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:105394200-105435000 Weak transcription Brain Cingulate Gyrus brain
2 chr12:105397400-105443200 Weak transcription H9 Cell Line embryonic stem cell
3 chr12:105409200-105446800 Weak transcription Left Ventricle heart
4 chr12:105409400-105465200 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr12:105410800-105446400 Weak transcription K562 blood
6 chr12:105412400-105440400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr12:105413000-105441800 Weak transcription Fetal Muscle Trunk muscle
8 chr12:105413000-105445000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr12:105413000-105476800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr12:105413200-105457800 Weak transcription Duodenum Mucosa Duodenum
11 chr12:105414800-105447200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr12:105414800-105454000 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr12:105415000-105440400 Weak transcription Gastric stomach
14 chr12:105418600-105441000 Weak transcription Pancreas Pancrea
15 chr12:105420000-105477000 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr12:105420200-105441000 Weak transcription Fetal Brain Male brain
17 chr12:105420400-105434600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr12:105420400-105435000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr12:105420400-105440600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr12:105420400-105448600 Weak transcription Ovary ovary
21 chr12:105420600-105435200 Strong transcription Osteobl bone
22 chr12:105420600-105442000 Weak transcription Fetal Lung lung
23 chr12:105420600-105442000 Weak transcription Rectal Smooth Muscle rectum
24 chr12:105420600-105447000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr12:105420800-105442000 Weak transcription Fetal Muscle Leg muscle
26 chr12:105422600-105442800 Weak transcription Stomach Smooth Muscle stomach
27 chr12:105423200-105459400 Weak transcription Lung lung
28 chr12:105423600-105440400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr12:105425200-105440800 Weak transcription A549 lung
30 chr12:105425800-105438200 Weak transcription Brain Germinal Matrix brain
31 chr12:105427000-105434800 Weak transcription Brain Inferior Temporal Lobe brain
32 chr12:105427000-105440400 Weak transcription Aorta Aorta
33 chr12:105429600-105440800 Weak transcription Fetal Brain Female brain
34 chr12:105430400-105435800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr12:105431000-105440400 Weak transcription NH-A brain
36 chr12:105431000-105446800 Weak transcription Colon Smooth Muscle Colon
37 chr12:105431200-105436600 Weak transcription HSMM muscle
38 chr12:105431400-105435200 Weak transcription NHLF lung
39 chr12:105431400-105435800 Weak transcription Muscle Satellite Cultured Cells --
40 chr12:105431400-105440200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr12:105431400-105440600 Weak transcription Adipose Nuclei Adipose
42 chr12:105431400-105445000 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr12:105431400-105461600 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr12:105431800-105434600 Strong transcription HMEC breast
45 chr12:105431800-105454800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr12:105432000-105443200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr12:105432200-105454600 Weak transcription NHEK skin
48 chr12:105432400-105436200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr12:105432600-105441200 Weak transcription NHDF-Ad bronchial
50 chr12:105433200-105435600 Strong transcription HSMMtube muscle

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Last update: Aug 31, 2015