The 2.0 version of rSNPBase

Variant report

Variant rs7313093
Chromosome Location chr12:105441580-105441581
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:105397400-105443200 Weak transcription H9 Cell Line embryonic stem cell
2 chr12:105409200-105446800 Weak transcription Left Ventricle heart
3 chr12:105409400-105465200 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr12:105410800-105446400 Weak transcription K562 blood
5 chr12:105413000-105441800 Weak transcription Fetal Muscle Trunk muscle
6 chr12:105413000-105445000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr12:105413000-105476800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr12:105413200-105457800 Weak transcription Duodenum Mucosa Duodenum
9 chr12:105414800-105447200 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr12:105414800-105454000 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr12:105420000-105477000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr12:105420400-105448600 Weak transcription Ovary ovary
13 chr12:105420600-105442000 Weak transcription Fetal Lung lung
14 chr12:105420600-105442000 Weak transcription Rectal Smooth Muscle rectum
15 chr12:105420600-105447000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr12:105420800-105442000 Weak transcription Fetal Muscle Leg muscle
17 chr12:105422600-105442800 Weak transcription Stomach Smooth Muscle stomach
18 chr12:105423200-105459400 Weak transcription Lung lung
19 chr12:105431000-105446800 Weak transcription Colon Smooth Muscle Colon
20 chr12:105431400-105445000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr12:105431400-105461600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr12:105431800-105454800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr12:105432000-105443200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr12:105432200-105454600 Weak transcription NHEK skin
25 chr12:105434000-105453000 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr12:105435200-105443000 Weak transcription Brain Hippocampus Middle brain
27 chr12:105435200-105453600 Weak transcription Fetal Stomach stomach
28 chr12:105435400-105445000 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr12:105435400-105445000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr12:105435600-105444800 Weak transcription Brain Cingulate Gyrus brain
31 chr12:105435600-105446200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr12:105435600-105467400 Weak transcription Brain Substantia Nigra brain
33 chr12:105435800-105446600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr12:105436200-105441800 Weak transcription NHLF lung
35 chr12:105436800-105445400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr12:105436800-105446600 Strong transcription Osteobl bone
37 chr12:105437200-105448600 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr12:105438200-105443800 Strong transcription Brain Germinal Matrix brain
39 chr12:105439000-105443800 Weak transcription Colonic Mucosa Colon
40 chr12:105439600-105446800 Strong transcription Breast Myoepithelial Primary Cells Breast
41 chr12:105439800-105446800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr12:105440200-105443600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr12:105440200-105445800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr12:105440200-105449800 Strong transcription HSMMtube muscle
45 chr12:105440400-105442400 Strong transcription Aorta Aorta
46 chr12:105440400-105444200 Strong transcription NH-A brain
47 chr12:105440400-105445400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr12:105440400-105445400 Strong transcription HMEC breast
49 chr12:105440400-105446000 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr12:105440400-105446600 Strong transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015