Variant report

Variant rs12830116
Chromosome Location chr12:47533679-47533680
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:47497400-47535200 Weak transcription Aorta Aorta
2 chr12:47505800-47538600 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr12:47506000-47535000 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr12:47506200-47538400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr12:47508400-47545200 Weak transcription HSMMtube muscle
6 chr12:47517200-47534600 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr12:47517400-47538400 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr12:47525200-47535200 Weak transcription Esophagus oesophagus
9 chr12:47527000-47547800 Weak transcription Ovary ovary
10 chr12:47529600-47535000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr12:47529600-47542600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr12:47529800-47535000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr12:47531800-47536000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr12:47531800-47538000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr12:47532400-47533800 Enhancers Primary neutrophils fromperipheralblood blood
16 chr12:47532400-47534000 Enhancers Primary monocytes fromperipheralblood blood
17 chr12:47532400-47534200 Enhancers Monocytes-CD14+_RO01746 blood
18 chr12:47532800-47533800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr12:47533000-47533800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr12:47533000-47533800 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr12:47533000-47533800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr12:47533000-47534000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
23 chr12:47533000-47536200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr12:47533200-47533800 ZNF genes & repeats Primary T cells fromperipheralblood blood
25 chr12:47533200-47536200 Weak transcription Primary B cells from peripheral blood blood
26 chr12:47533400-47535000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr12:47533400-47535200 Weak transcription Fetal Intestine Small intestine
28 chr12:47533400-47541800 Weak transcription Osteobl bone
29 chr12:47533600-47534800 Weak transcription HMEC breast
30 chr12:47533600-47534800 Weak transcription NHEK skin
31 chr12:47533600-47535200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr12:47533600-47536200 Weak transcription Primary B cells from cord blood blood
33 chr12:47533600-47536200 Strong transcription Primary T cells from cord blood blood
34 chr12:47533600-47538600 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr12:47533600-47538600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr12:47533600-47542200 Weak transcription Spleen Spleen

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