The 2.0 version of rSNPBase

Variant report

Variant rs12830471
Chromosome Location chr12:11809013-11809014
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11803600-11809800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
2 chr12:11804200-11814000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:11804600-11810600 Weak transcription Placenta Amnion Placenta Amnion
4 chr12:11804800-11809800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr12:11805200-11809200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr12:11806000-11809400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr12:11806000-11810200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr12:11806000-11812800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr12:11806000-11813000 Enhancers Cortex derived primary cultured neurospheres brain
10 chr12:11806000-11813600 Weak transcription Fetal Intestine Large intestine
11 chr12:11806000-11814200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr12:11806200-11809600 Enhancers Primary B cells from peripheral blood blood
13 chr12:11806200-11815800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr12:11806200-11816600 Weak transcription Hela-S3 cervix
15 chr12:11806400-11809200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr12:11806400-11809200 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr12:11806400-11809200 Weak transcription Placenta Placenta
18 chr12:11806400-11809400 Weak transcription H1 Cell Line embryonic stem cell
19 chr12:11806400-11809400 Weak transcription H9 Cell Line embryonic stem cell
20 chr12:11806400-11809400 Weak transcription A549 lung
21 chr12:11806400-11810200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr12:11806400-11810600 Enhancers Primary monocytes fromperipheralblood blood
23 chr12:11806400-11810600 Weak transcription Brain Germinal Matrix brain
24 chr12:11806400-11811400 Weak transcription Muscle Satellite Cultured Cells --
25 chr12:11806400-11811400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr12:11806400-11811400 Weak transcription NHDF-Ad bronchial
27 chr12:11806400-11811600 Weak transcription Brain Cingulate Gyrus brain
28 chr12:11806400-11811800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr12:11806400-11813200 Enhancers Primary T helper 17 cells PMA-I stimulated --
30 chr12:11806400-11814000 Weak transcription Colonic Mucosa Colon
31 chr12:11806400-11815800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr12:11806600-11809200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr12:11806600-11809400 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr12:11806600-11810000 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr12:11806600-11810000 Weak transcription Osteobl bone
36 chr12:11806600-11810200 Weak transcription Primary T cells from cord blood blood
37 chr12:11806600-11811400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr12:11806600-11811400 Weak transcription HSMMtube muscle
39 chr12:11806600-11811600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr12:11806600-11811800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr12:11806600-11811800 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr12:11806600-11812000 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr12:11806600-11813000 Enhancers Primary T helper cells fromperipheralblood blood
44 chr12:11806600-11813800 Weak transcription Fetal Intestine Small intestine
45 chr12:11806600-11814000 Weak transcription Gastric stomach
46 chr12:11806600-11814400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr12:11806600-11814400 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr12:11806600-11814600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr12:11806600-11819200 Weak transcription NHLF lung
50 chr12:11806800-11809600 Weak transcription NH-A brain

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Last update: Aug 31, 2015