The 2.0 version of rSNPBase

Variant report

Variant rs12877821
Chromosome Location chr13:76355397-76355398
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:76323800-76356600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr13:76338000-76356800 Weak transcription Brain Anterior Caudate brain
3 chr13:76338000-76362800 Weak transcription Fetal Stomach stomach
4 chr13:76338600-76356600 Weak transcription Left Ventricle heart
5 chr13:76338800-76371000 Weak transcription Fetal Thymus thymus
6 chr13:76340000-76363600 Weak transcription Thymus Thymus
7 chr13:76342400-76357800 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr13:76343400-76370800 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr13:76344800-76356800 Weak transcription Fetal Lung lung
10 chr13:76346800-76361600 Weak transcription Duodenum Mucosa Duodenum
11 chr13:76347400-76358000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr13:76347400-76361400 Weak transcription HMEC breast
13 chr13:76347800-76356400 Weak transcription NH-A brain
14 chr13:76347800-76356600 Weak transcription HSMMtube muscle
15 chr13:76347800-76356800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr13:76347800-76361400 Weak transcription Gastric stomach
17 chr13:76348400-76356600 Weak transcription Liver Liver
18 chr13:76349000-76356800 Weak transcription NHLF lung
19 chr13:76350000-76371000 Weak transcription Primary T cells fromperipheralblood blood
20 chr13:76350200-76358000 Weak transcription Small Intestine intestine
21 chr13:76350600-76361200 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr13:76351200-76356600 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr13:76351400-76356600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr13:76351400-76360200 Weak transcription Right Ventricle heart
25 chr13:76351600-76356600 Weak transcription Muscle Satellite Cultured Cells --
26 chr13:76351800-76356800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr13:76352800-76357200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr13:76353400-76356400 Weak transcription Hela-S3 cervix
29 chr13:76353400-76356600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr13:76353400-76362800 Weak transcription Lung lung
31 chr13:76353400-76370600 Weak transcription Primary T cells from cord blood blood
32 chr13:76353800-76356200 Weak transcription HSMM muscle
33 chr13:76353800-76356600 Weak transcription NHDF-Ad bronchial
34 chr13:76353800-76357200 Weak transcription HepG2 liver
35 chr13:76353800-76357600 Weak transcription A549 lung
36 chr13:76354000-76356600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr13:76354800-76356400 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr13:76354800-76357600 Weak transcription Fetal Intestine Large intestine
39 chr13:76354800-76358000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr13:76355000-76356400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr13:76355000-76356600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr13:76355000-76357600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr13:76355200-76356400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr13:76355200-76356400 Weak transcription Osteobl bone
45 chr13:76355200-76357400 Weak transcription Fetal Intestine Small intestine
46 chr13:76355200-76362400 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015