The 2.0 version of rSNPBase

Variant report

Variant rs1470273
Chromosome Location chr13:76342377-76342378
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:76308200-76345200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr13:76323800-76356600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr13:76334800-76343600 Genic enhancers Osteobl bone
4 chr13:76337000-76344400 Weak transcription Ovary ovary
5 chr13:76337400-76344200 Weak transcription Placenta Placenta
6 chr13:76337400-76347600 Weak transcription Gastric stomach
7 chr13:76337600-76342400 Enhancers Primary T helper naive cells fromperipheralblood blood
8 chr13:76337600-76343400 Weak transcription Fetal Kidney kidney
9 chr13:76337600-76344200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr13:76338000-76344600 Weak transcription HMEC breast
11 chr13:76338000-76344600 Weak transcription NHEK skin
12 chr13:76338000-76356800 Weak transcription Brain Anterior Caudate brain
13 chr13:76338000-76362800 Weak transcription Fetal Stomach stomach
14 chr13:76338200-76342600 Enhancers Fetal Intestine Large intestine
15 chr13:76338600-76343800 Weak transcription Placenta Amnion Placenta Amnion
16 chr13:76338600-76345000 Weak transcription Colonic Mucosa Colon
17 chr13:76338600-76356600 Weak transcription Left Ventricle heart
18 chr13:76338800-76343400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr13:76338800-76343800 Enhancers A549 lung
20 chr13:76338800-76371000 Weak transcription Fetal Thymus thymus
21 chr13:76339000-76348200 Enhancers Fetal Intestine Small intestine
22 chr13:76339400-76342600 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr13:76339400-76343200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr13:76339400-76343400 Enhancers Primary T helper cells PMA-I stimulated --
25 chr13:76339800-76342400 Weak transcription NHLF lung
26 chr13:76339800-76342600 Enhancers Primary T helper cells fromperipheralblood blood
27 chr13:76339800-76344600 Weak transcription Fetal Heart heart
28 chr13:76340000-76343400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr13:76340000-76343400 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr13:76340000-76363600 Weak transcription Thymus Thymus
31 chr13:76340200-76343200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr13:76340200-76343400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr13:76340200-76343400 Weak transcription Psoas Muscle Psoas
34 chr13:76340200-76343400 Weak transcription HSMMtube muscle
35 chr13:76340200-76343600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr13:76340200-76343800 Strong transcription HSMM muscle
37 chr13:76340200-76344200 Weak transcription Fetal Lung lung
38 chr13:76340200-76347200 Weak transcription Pancreas Pancrea
39 chr13:76340200-76349200 Enhancers NHDF-Ad bronchial
40 chr13:76340600-76342400 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr13:76340600-76344400 Weak transcription NH-A brain
42 chr13:76340800-76344200 Weak transcription Small Intestine intestine
43 chr13:76340800-76347200 Enhancers HepG2 liver
44 chr13:76341000-76343800 Weak transcription Muscle Satellite Cultured Cells --
45 chr13:76341200-76343400 Weak transcription Liver Liver
46 chr13:76341200-76346000 Weak transcription HUVEC blood vessel
47 chr13:76341400-76342600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr13:76341800-76343800 Enhancers Hela-S3 cervix
49 chr13:76341800-76352800 Weak transcription Primary T cells from cord blood blood
50 chr13:76342000-76342600 Enhancers Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015