Variant report

Variant	rs12899200
Chromosome Location	chr15:60620220-60620221
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1033027	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12899562	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1567408	0.81[EUR][1000 genomes]
rs2014953	0.82[EUR][1000 genomes]
rs2063322	0.82[EUR][1000 genomes]
rs2063324	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2063325	0.81[EUR][1000 genomes]
rs2136553	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2136555	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2175187	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2202920	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2414667	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2414668	0.81[EUR][1000 genomes]
rs4485290	0.80[EUR][1000 genomes]
rs4775257	0.81[EUR][1000 genomes]
rs7165592	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7172784	0.81[EUR][1000 genomes]
rs7178033	0.81[EUR][1000 genomes]
rs8027359	0.80[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60619600-60621200	Weak transcription	HMEC	breast
2	chr15:60619800-60621600	Weak transcription	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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