Variant report

Variant	rs7165592
Chromosome Location	chr15:60619296-60619297
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:60209749..60210266-chr15:60618767..60619600,2	MCF-7	breast:
2	chr15:60209756..60210383-chr15:60618737..60619952,3	K562	blood:
3	chr15:59983231..59984005-chr15:60618723..60619489,3	K562	blood:
4	chr15:60578723..60579576-chr15:60618794..60619434,2	MCF-7	breast:
5	chr15:60043711..60044614-chr15:60618768..60619694,2	MCF-7	breast:
6	chr15:60613168..60616149-chr15:60617652..60620120,3	K562	blood:
7	chr15:59982442..59985079-chr15:60617660..60619822,3	K562	blood:
8	chr15:60504443..60505284-chr15:60618698..60619648,2	MCF-7	breast:
9	chr15:60017218..60017853-chr15:60618748..60619637,3	K562	blood:

No data

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs1033027	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10851676	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10851679	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11071519	0.96[ASN][1000 genomes]
rs11631793	0.89[EUR][1000 genomes]
rs11631850	0.89[EUR][1000 genomes]
rs11634259	0.89[EUR][1000 genomes]
rs11854079	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12439973	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12440492	0.85[EUR][1000 genomes]
rs12441980	0.89[EUR][1000 genomes]
rs12708462	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12898604	0.88[EUR][1000 genomes]
rs12899200	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12899562	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12904910	0.88[EUR][1000 genomes]
rs1551349	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1567408	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1967370	0.86[EUR][1000 genomes]
rs2014953	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2063322	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2063324	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2063325	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2085037	0.88[EUR][1000 genomes]
rs2123828	0.89[EUR][1000 genomes]
rs2123833	0.85[EUR][1000 genomes]
rs2136553	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2136555	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2168013	0.89[EUR][1000 genomes]
rs2175187	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2202920	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2414667	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2414668	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2414670	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3743269	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3743270	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3825957	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4485290	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4530072	0.93[ASN][1000 genomes]
rs4775257	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6494191	0.93[ASN][1000 genomes]
rs7167571	0.89[EUR][1000 genomes]
rs7170178	0.92[ASN][1000 genomes]
rs7170421	0.92[ASN][1000 genomes]
rs7172784	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7176280	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7178033	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7179548	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7180174	0.88[EUR][1000 genomes]
rs8027359	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8029375	0.89[EUR][1000 genomes]
rs8033896	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8039867	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs979163	0.81[EUR][1000 genomes]
rs9920432	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9920513	0.96[ASN][1000 genomes]
rs9920684	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9920735	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9920883	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9972449	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60616000-60619600	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr15:60617000-60619400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr15:60618600-60619600	Bivalent Enhancer	A549	lung
4	chr15:60619000-60619600	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
5	chr15:60619200-60619400	Bivalent Enhancer	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr15:60619200-60619600	Bivalent Enhancer	Brain Hippocampus Middle	brain

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