Variant report

Variant	rs9920883
Chromosome Location	chr15:60613742-60613743
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:60613168..60616149-chr15:60617652..60620120,3	K562	blood:

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs1033027	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10851676	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10851679	0.82[EUR][1000 genomes]
rs11071519	0.95[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.90[ASN][1000 genomes]
rs11071521	0.95[CEU][hapmap];0.86[CHB][hapmap];0.97[GIH][hapmap];0.87[JPT][hapmap];0.93[MEX][hapmap];0.92[TSI][hapmap]
rs11631793	0.94[CEU][hapmap];0.81[CHB][hapmap];0.85[JPT][hapmap];0.86[EUR][1000 genomes]
rs11631850	0.86[EUR][1000 genomes]
rs11634259	0.86[EUR][1000 genomes]
rs11854079	0.91[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes]
rs12439973	0.91[CEU][hapmap];0.86[CHB][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.87[EUR][1000 genomes]
rs12440492	0.83[EUR][1000 genomes]
rs12441980	0.95[CEU][hapmap];0.86[CHB][hapmap];0.87[JPT][hapmap];0.86[EUR][1000 genomes]
rs12708462	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12898604	0.95[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];0.93[MEX][hapmap];0.86[TSI][hapmap];0.87[EUR][1000 genomes]
rs12899562	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12904910	0.91[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes]
rs1551349	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1567408	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1967370	0.86[EUR][1000 genomes]
rs2014953	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2063322	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2063324	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2063325	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2085037	0.95[CEU][hapmap];0.86[CHB][hapmap];0.91[JPT][hapmap];0.88[EUR][1000 genomes]
rs2123828	0.95[CEU][hapmap];0.86[CHB][hapmap];0.91[JPT][hapmap];0.89[EUR][1000 genomes]
rs2123833	0.83[EUR][1000 genomes]
rs2136553	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2136555	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2168013	0.95[CEU][hapmap];0.86[CHB][hapmap];0.97[GIH][hapmap];0.91[JPT][hapmap];0.93[MEX][hapmap];0.92[TSI][hapmap];0.86[EUR][1000 genomes]
rs2175187	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2202920	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2414667	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2414668	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2414670	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3743269	0.91[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes]
rs3743270	0.91[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes]
rs3825957	0.91[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];0.93[MEX][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes]
rs4485290	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4530072	0.87[ASN][1000 genomes]
rs4775257	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6494191	0.87[ASN][1000 genomes]
rs7165592	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7167571	0.91[CEU][hapmap];0.86[CHB][hapmap];0.91[JPT][hapmap];0.87[EUR][1000 genomes]
rs7170178	0.91[CHB][hapmap];0.86[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7170421	0.86[ASN][1000 genomes]
rs7172784	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7178033	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7179548	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7180174	0.90[CEU][hapmap];0.86[CHB][hapmap];0.87[JPT][hapmap];0.87[EUR][1000 genomes]
rs8027359	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8029375	0.91[CEU][hapmap];0.86[CHB][hapmap];0.97[GIH][hapmap];0.87[JPT][hapmap];0.93[MEX][hapmap];0.92[TSI][hapmap];0.86[EUR][1000 genomes]
rs8033896	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8037326	0.91[CEU][hapmap];0.86[CHB][hapmap];0.90[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap]
rs8039867	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs979163	0.82[EUR][1000 genomes]
rs9920432	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9920513	0.90[ASN][1000 genomes]
rs9920684	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9920735	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9972449	0.91[CEU][hapmap];0.86[CHB][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.88[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60605000-60616000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr15:60611600-60617400	Weak transcription	Aorta	Aorta

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