The 2.0 version of rSNPBase

Variant report

Variant rs12906122
Chromosome Location chr15:49257201-49257202
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49255000-49257800 Enhancers Spleen Spleen
2 chr15:49256000-49259200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr15:49256200-49257400 Bivalent Enhancer Primary T cells fromperipheralblood blood
4 chr15:49256400-49257400 Bivalent Enhancer Thymus Thymus
5 chr15:49256400-49257800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
6 chr15:49256400-49258200 Weak transcription HSMM muscle
7 chr15:49256400-49258600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr15:49256400-49259800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
9 chr15:49256400-49266800 Weak transcription Brain Substantia Nigra brain
10 chr15:49256400-49267200 Weak transcription Aorta Aorta
11 chr15:49256600-49257400 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
12 chr15:49256600-49257600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr15:49256600-49257600 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr15:49256600-49257600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:49256600-49257800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr15:49256600-49257800 Weak transcription NHEK skin
17 chr15:49256600-49258000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr15:49256600-49258200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr15:49256600-49258200 Weak transcription NHDF-Ad bronchial
20 chr15:49256600-49258400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr15:49256600-49258400 Weak transcription HSMMtube muscle
22 chr15:49256600-49258400 Weak transcription NH-A brain
23 chr15:49256600-49258400 Weak transcription NHLF lung
24 chr15:49256600-49258400 Weak transcription Osteobl bone
25 chr15:49256600-49258600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr15:49256600-49259000 Enhancers Hela-S3 cervix
27 chr15:49256600-49259600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
28 chr15:49256800-49257400 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
29 chr15:49256800-49257400 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr15:49256800-49257600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
31 chr15:49256800-49258400 Weak transcription Muscle Satellite Cultured Cells --
32 chr15:49256800-49265200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr15:49257000-49257400 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
34 chr15:49257000-49258200 Bivalent Enhancer Primary T cells from cord blood blood
35 chr15:49257000-49259000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr15:49257200-49257600 Weak transcription Dnd41 blood
37 chr15:49257200-49258400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr15:49257200-49259800 Enhancers HMEC breast

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Last update: Aug 31, 2015