Variant report

Variant rs12911998
Chromosome Location chr15:78111563-78111564
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78107400-78111600 Weak transcription Gastric stomach
2 chr15:78109800-78111800 Bivalent Enhancer Spleen Spleen
3 chr15:78110600-78111600 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:78110600-78111600 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
5 chr15:78110600-78111600 Bivalent Enhancer Esophagus oesophagus
6 chr15:78110600-78111600 Bivalent Enhancer Fetal Muscle Leg muscle
7 chr15:78110600-78111800 Bivalent Enhancer Placenta Placenta
8 chr15:78110600-78112800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
9 chr15:78110600-78112800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
10 chr15:78110600-78113000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
11 chr15:78110600-78113000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
12 chr15:78110600-78113200 Active TSS Brain Angular Gyrus brain
13 chr15:78110800-78111600 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr15:78110800-78111600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
15 chr15:78110800-78111600 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr15:78110800-78111600 Bivalent Enhancer Colonic Mucosa Colon
17 chr15:78110800-78111600 Bivalent/Poised TSS Right Ventricle heart
18 chr15:78110800-78111600 Bivalent Enhancer HMEC breast
19 chr15:78110800-78112800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
20 chr15:78110800-78112800 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
21 chr15:78110800-78113000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
22 chr15:78111000-78111600 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
23 chr15:78111000-78111600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr15:78111000-78111600 Bivalent Enhancer Lung lung
25 chr15:78111000-78112600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
26 chr15:78111000-78112600 Active TSS Fetal Brain Female brain
27 chr15:78111000-78112800 Active TSS H9 Cell Line embryonic stem cell
28 chr15:78111000-78112800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
29 chr15:78111000-78112800 Bivalent/Poised TSS Brain Hippocampus Middle brain
30 chr15:78111000-78112800 Bivalent/Poised TSS Ovary ovary
31 chr15:78111000-78113000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
32 chr15:78111000-78113600 Active TSS Brain Inferior Temporal Lobe brain
33 chr15:78111200-78111600 Active TSS Primary hematopoietic stem cells blood
34 chr15:78111200-78111600 Enhancers Pancreas Pancrea
35 chr15:78111200-78112200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
36 chr15:78111200-78112600 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr15:78111200-78112600 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
38 chr15:78111200-78112600 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
39 chr15:78111200-78112600 Bivalent/Poised TSS Fetal Intestine Small intestine
40 chr15:78111200-78112600 Bivalent/Poised TSS Thymus Thymus
41 chr15:78111200-78112800 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
42 chr15:78111200-78112800 Bivalent/Poised TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr15:78111200-78112800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr15:78111200-78112800 Enhancers Primary B cells from cord blood blood
45 chr15:78111200-78112800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
46 chr15:78111200-78112800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
47 chr15:78111200-78112800 Bivalent/Poised TSS A549 lung
48 chr15:78111200-78113000 Active TSS Brain Anterior Caudate brain
49 chr15:78111400-78111600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr15:78111400-78111600 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --

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