Variant report

Variant rs12913049
Chromosome Location chr15:77485557-77485558
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77451200-77491800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr15:77461600-77496800 Weak transcription Lung lung
3 chr15:77465400-77488200 Weak transcription Psoas Muscle Psoas
4 chr15:77467200-77491400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr15:77469800-77491200 Weak transcription Stomach Smooth Muscle stomach
6 chr15:77469800-77499200 Weak transcription Rectal Smooth Muscle rectum
7 chr15:77471400-77505800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:77471800-77491400 Weak transcription Aorta Aorta
9 chr15:77472400-77500800 Weak transcription HSMMtube muscle
10 chr15:77473600-77527800 Weak transcription Placenta Placenta
11 chr15:77474200-77490600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr15:77476400-77491400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr15:77477200-77485800 Enhancers Fetal Heart heart
14 chr15:77479400-77486400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr15:77479400-77494400 Weak transcription HepG2 liver
16 chr15:77479600-77490800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr15:77480400-77487600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr15:77480400-77488000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr15:77480400-77488000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr15:77480400-77488200 Weak transcription Fetal Intestine Large intestine
21 chr15:77480400-77492000 Weak transcription Small Intestine intestine
22 chr15:77480400-77492000 Weak transcription Thymus Thymus
23 chr15:77480400-77528000 Weak transcription Fetal Stomach stomach
24 chr15:77480600-77485600 Weak transcription NHEK skin
25 chr15:77480600-77487600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr15:77480600-77488000 Weak transcription Brain Substantia Nigra brain
27 chr15:77480600-77488000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr15:77480600-77490600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr15:77480600-77490600 Weak transcription HSMM muscle
30 chr15:77480800-77491200 Weak transcription NH-A brain
31 chr15:77481000-77487600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr15:77481000-77488000 Weak transcription Fetal Kidney kidney
33 chr15:77481000-77490600 Weak transcription Muscle Satellite Cultured Cells --
34 chr15:77481200-77487800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr15:77481200-77490400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr15:77481200-77490800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr15:77481200-77490800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr15:77481800-77490400 Weak transcription Osteobl bone
39 chr15:77481800-77490600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr15:77481800-77490800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr15:77481800-77491200 Weak transcription Primary T cells from cord blood blood
42 chr15:77481800-77491600 Weak transcription NHLF lung
43 chr15:77482000-77490600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr15:77482000-77490600 Weak transcription Brain Cingulate Gyrus brain
45 chr15:77482000-77490600 Weak transcription HUVEC blood vessel
46 chr15:77482000-77506200 Weak transcription Pancreas Pancrea
47 chr15:77482200-77490600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr15:77482200-77490600 Weak transcription Primary hematopoietic stem cells blood
49 chr15:77482200-77490800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr15:77482200-77491000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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