The 2.0 version of rSNPBase

Variant report

Variant rs34113420
Chromosome Location chr15:77470045-77470046
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77437000-77471200 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr15:77438600-77470800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:77450400-77471200 Weak transcription Fetal Muscle Leg muscle
4 chr15:77450600-77471200 Weak transcription Muscle Satellite Cultured Cells --
5 chr15:77450800-77471200 Weak transcription Fetal Muscle Trunk muscle
6 chr15:77451000-77470800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr15:77451000-77470800 Weak transcription Brain Hippocampus Middle brain
8 chr15:77451000-77471200 Weak transcription HSMM muscle
9 chr15:77451000-77478800 Weak transcription Brain Cingulate Gyrus brain
10 chr15:77451200-77471800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr15:77451200-77491800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr15:77451400-77471200 Weak transcription NHDF-Ad bronchial
13 chr15:77454000-77471200 Weak transcription NHLF lung
14 chr15:77454000-77472400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr15:77454200-77471200 Weak transcription Placenta Placenta
16 chr15:77454800-77471200 Weak transcription Primary T cells fromperipheralblood blood
17 chr15:77456400-77471800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr15:77456600-77470800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr15:77456600-77471400 Weak transcription Primary hematopoietic stem cells blood
20 chr15:77456600-77471600 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr15:77457200-77471600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr15:77457200-77475200 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr15:77457200-77475400 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr15:77457800-77471200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr15:77458200-77471200 Weak transcription Spleen Spleen
26 chr15:77460000-77470200 Weak transcription Primary B cells from cord blood blood
27 chr15:77460800-77471200 Weak transcription Fetal Lung lung
28 chr15:77460800-77479200 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr15:77461200-77471200 Weak transcription Right Ventricle heart
30 chr15:77461400-77471200 Weak transcription Fetal Stomach stomach
31 chr15:77461600-77471000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr15:77461600-77471200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr15:77461600-77471200 Weak transcription Aorta Aorta
34 chr15:77461600-77471200 Weak transcription Left Ventricle heart
35 chr15:77461600-77471800 Weak transcription HSMMtube muscle
36 chr15:77461600-77496800 Weak transcription Lung lung
37 chr15:77461800-77470600 Weak transcription Fetal Heart heart
38 chr15:77461800-77470800 Weak transcription Primary T cells from cord blood blood
39 chr15:77461800-77472400 Weak transcription NH-A brain
40 chr15:77465200-77477000 Weak transcription Gastric stomach
41 chr15:77465400-77471200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr15:77465400-77488200 Weak transcription Psoas Muscle Psoas
43 chr15:77466000-77471000 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr15:77466200-77470600 Weak transcription Fetal Intestine Large intestine
45 chr15:77466200-77471200 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr15:77466200-77479000 Weak transcription Brain Anterior Caudate brain
47 chr15:77466200-77479400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr15:77466400-77470600 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr15:77466400-77470800 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr15:77466400-77472000 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015