Variant report

Variant rs12924413
Chromosome Location chr16:72129745-72129746
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72128400-72130000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr16:72128600-72130000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr16:72128600-72130000 Weak transcription Esophagus oesophagus
4 chr16:72128600-72130000 Weak transcription Gastric stomach
5 chr16:72128600-72130200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr16:72128600-72132600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr16:72128800-72129800 Enhancers Primary neutrophils fromperipheralblood blood
8 chr16:72128800-72129800 Enhancers Primary T cells fromperipheralblood blood
9 chr16:72128800-72129800 Enhancers Primary T helper cells fromperipheralblood blood
10 chr16:72128800-72129800 Enhancers Liver Liver
11 chr16:72128800-72129800 Weak transcription Fetal Muscle Trunk muscle
12 chr16:72128800-72129800 Weak transcription Ovary ovary
13 chr16:72128800-72130000 Weak transcription H9 Cell Line embryonic stem cell
14 chr16:72128800-72130000 Weak transcription Aorta Aorta
15 chr16:72128800-72130000 Weak transcription Left Ventricle heart
16 chr16:72128800-72130000 Weak transcription Lung lung
17 chr16:72128800-72131400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr16:72128800-72132600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr16:72128800-72136000 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr16:72129000-72129800 Enhancers Primary T regulatory cells fromperipheralblood blood
21 chr16:72129000-72129800 Enhancers Fetal Heart heart
22 chr16:72129000-72129800 Enhancers Skeletal Muscle Male skeletal muscle
23 chr16:72129000-72130000 Weak transcription H1 Cell Line embryonic stem cell
24 chr16:72129000-72130000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr16:72129000-72130000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr16:72129000-72130000 Enhancers Spleen Spleen
27 chr16:72129000-72130400 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr16:72129000-72130600 Weak transcription Right Ventricle heart
29 chr16:72129200-72129800 Enhancers Primary T helper cells PMA-I stimulated --
30 chr16:72129200-72129800 Enhancers Colon Smooth Muscle Colon
31 chr16:72129200-72129800 Enhancers Duodenum Smooth Muscle Duodenum
32 chr16:72129200-72129800 Enhancers HUVEC blood vessel
33 chr16:72129200-72130000 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr16:72129200-72130000 Weak transcription Primary hematopoietic stem cells blood
35 chr16:72129200-72130000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr16:72129200-72130000 Weak transcription Fetal Kidney kidney
37 chr16:72129200-72130000 Weak transcription Placenta Amnion Placenta Amnion
38 chr16:72129200-72130000 Enhancers Rectal Smooth Muscle rectum
39 chr16:72129200-72130200 Weak transcription Brain Angular Gyrus brain
40 chr16:72129200-72130200 Weak transcription Colonic Mucosa Colon
41 chr16:72129200-72130200 Weak transcription A549 lung
42 chr16:72129200-72130400 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr16:72129200-72133000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr16:72129200-72133600 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr16:72129200-72135000 Strong transcription Fetal Muscle Leg muscle
46 chr16:72129400-72129800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr16:72129400-72129800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr16:72129400-72129800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr16:72129400-72129800 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr16:72129400-72129800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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