Variant report

Variant rs1293309
Chromosome Location chr8:11723775-11723776
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:11706600-11724400 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr8:11706800-11724400 Weak transcription H9 Cell Line embryonic stem cell
3 chr8:11708600-11724600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr8:11711600-11723800 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr8:11712000-11724600 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr8:11718400-11723800 Enhancers Stomach Mucosa stomach
7 chr8:11719000-11724400 Weak transcription Aorta Aorta
8 chr8:11719800-11723800 Enhancers Placenta Amnion Placenta Amnion
9 chr8:11720000-11724000 Enhancers Ovary ovary
10 chr8:11720400-11723800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr8:11720400-11723800 Weak transcription Brain Germinal Matrix brain
12 chr8:11720400-11723800 Genic enhancers Fetal Stomach stomach
13 chr8:11720800-11723800 Weak transcription GM12878-XiMat blood
14 chr8:11721000-11723800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr8:11721000-11724000 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr8:11721200-11723800 Transcr. at gene 5' and 3' Osteobl bone
17 chr8:11721200-11724800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
18 chr8:11721600-11723800 Enhancers Pancreas Pancrea
19 chr8:11721600-11724000 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr8:11721600-11724200 Enhancers Fetal Heart heart
21 chr8:11721600-11724400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr8:11721600-11724800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
23 chr8:11721800-11725000 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
24 chr8:11722000-11724200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
25 chr8:11722200-11723800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr8:11722200-11723800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr8:11722200-11723800 Weak transcription Fetal Lung lung
28 chr8:11722400-11724400 Enhancers Fetal Brain Male brain
29 chr8:11722400-11724400 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr8:11722400-11724600 Flanking Active TSS Duodenum Mucosa Duodenum
31 chr8:11722600-11723800 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr8:11722600-11723800 Active TSS Brain Inferior Temporal Lobe brain
33 chr8:11722600-11723800 Enhancers Small Intestine intestine
34 chr8:11722600-11724000 Transcr. at gene 5' and 3' NHLF lung
35 chr8:11722600-11724200 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr8:11722600-11724600 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
37 chr8:11722600-11724600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
38 chr8:11722600-11724600 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr8:11722600-11724600 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
40 chr8:11722600-11724600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
41 chr8:11722600-11724600 Active TSS Right Atrium heart
42 chr8:11722600-11724800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
43 chr8:11722800-11723800 Active TSS Esophagus oesophagus
44 chr8:11722800-11723800 Enhancers Left Ventricle heart
45 chr8:11722800-11723800 Enhancers Rectal Mucosa Donor 31 rectum
46 chr8:11722800-11723800 Weak transcription Thymus Thymus
47 chr8:11722800-11723800 Weak transcription HSMMtube muscle
48 chr8:11722800-11724200 Enhancers Sigmoid Colon Sigmoid Colon
49 chr8:11722800-11724800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
50 chr8:11723000-11724200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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