The 2.0 version of rSNPBase

Variant report

Variant rs12959004
Chromosome Location chr18:13312134-13312135
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13285000-13316200 Weak transcription Aorta Aorta
2 chr18:13295600-13312600 Weak transcription Dnd41 blood
3 chr18:13298800-13314600 Weak transcription Fetal Intestine Small intestine
4 chr18:13303000-13314400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr18:13303200-13312400 Weak transcription Stomach Smooth Muscle stomach
6 chr18:13303200-13314400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr18:13303200-13314600 Weak transcription Colonic Mucosa Colon
8 chr18:13303200-13316600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr18:13303200-13318600 Weak transcription Rectal Smooth Muscle rectum
10 chr18:13303200-13318600 Weak transcription Right Atrium heart
11 chr18:13303400-13314600 Weak transcription Fetal Lung lung
12 chr18:13303400-13314600 Weak transcription Fetal Stomach stomach
13 chr18:13303600-13318600 Weak transcription Colon Smooth Muscle Colon
14 chr18:13304400-13313200 Weak transcription Spleen Spleen
15 chr18:13304600-13315000 Weak transcription Brain Hippocampus Middle brain
16 chr18:13305000-13315000 Weak transcription Brain Anterior Caudate brain
17 chr18:13306800-13315800 Weak transcription Adipose Nuclei Adipose
18 chr18:13308600-13312400 Weak transcription Liver Liver
19 chr18:13308600-13314400 Weak transcription Duodenum Mucosa Duodenum
20 chr18:13308600-13314600 Weak transcription Brain Germinal Matrix brain
21 chr18:13308800-13312400 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr18:13308800-13313200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr18:13309000-13312600 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr18:13309000-13313000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr18:13309000-13315800 Weak transcription Small Intestine intestine
26 chr18:13309200-13312600 Weak transcription Fetal Brain Female brain
27 chr18:13309400-13312600 Genic enhancers Fetal Thymus thymus
28 chr18:13309800-13312400 Weak transcription Primary T cells from cord blood blood
29 chr18:13309800-13312400 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr18:13309800-13315800 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr18:13309800-13315800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr18:13310200-13312600 Weak transcription Primary T cells fromperipheralblood blood
33 chr18:13310200-13316000 Weak transcription Fetal Heart heart
34 chr18:13310600-13313200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr18:13310600-13316400 Weak transcription Left Ventricle heart
36 chr18:13310600-13318600 Weak transcription Right Ventricle heart
37 chr18:13310800-13312400 Weak transcription Primary hematopoietic stem cells blood
38 chr18:13310800-13312600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr18:13311400-13312600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr18:13311400-13313000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr18:13311600-13312600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr18:13311600-13313000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr18:13311800-13314000 Enhancers Thymus Thymus
44 chr18:13311800-13315800 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr18:13312000-13313200 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015