Variant report

Variant rs11080642
Chromosome Location chr18:13320983-13320984
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13314800-13325000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr18:13316600-13322600 Weak transcription Dnd41 blood
3 chr18:13317000-13326400 Weak transcription Brain Angular Gyrus brain
4 chr18:13317200-13322000 Weak transcription Duodenum Mucosa Duodenum
5 chr18:13317200-13323200 Weak transcription Brain Germinal Matrix brain
6 chr18:13317400-13331200 Weak transcription Primary T cells from cord blood blood
7 chr18:13318800-13325400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr18:13319200-13321000 Enhancers Adipose Nuclei Adipose
9 chr18:13319400-13321200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr18:13319400-13327200 Weak transcription Fetal Muscle Leg muscle
11 chr18:13319600-13321400 Enhancers Fetal Lung lung
12 chr18:13319800-13327000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr18:13320000-13321000 Enhancers Cortex derived primary cultured neurospheres brain
14 chr18:13320400-13321000 Genic enhancers Stomach Smooth Muscle stomach
15 chr18:13320400-13321200 Genic enhancers Fetal Thymus thymus
16 chr18:13320400-13321200 Enhancers Right Atrium heart
17 chr18:13320400-13321400 Strong transcription Thymus Thymus
18 chr18:13320400-13338200 Weak transcription Small Intestine intestine
19 chr18:13320600-13321000 Genic enhancers Aorta Aorta
20 chr18:13320600-13321000 Enhancers Brain Hippocampus Middle brain
21 chr18:13320600-13321200 Enhancers Fetal Heart heart
22 chr18:13320600-13321200 Enhancers Left Ventricle heart
23 chr18:13320600-13321400 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr18:13320600-13321800 Enhancers Right Ventricle heart
25 chr18:13320800-13321200 Enhancers Brain Inferior Temporal Lobe brain
26 chr18:13320800-13322000 Weak transcription Fetal Muscle Trunk muscle
27 chr18:13320800-13323200 Weak transcription Brain Anterior Caudate brain

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