Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs11679527	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12470045	0.82[EUR][1000 genomes]
rs12470129	0.81[EUR][1000 genomes]
rs12470150	0.82[EUR][1000 genomes]
rs12470195	0.82[EUR][1000 genomes]
rs12473156	0.83[EUR][1000 genomes]
rs12473185	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12692811	0.83[EUR][1000 genomes]
rs12692813	0.83[EUR][1000 genomes]
rs12692814	0.83[EUR][1000 genomes]
rs13023658	0.83[ASN][1000 genomes]
rs13403237	0.83[EUR][1000 genomes]
rs13416415	0.83[EUR][1000 genomes]
rs1447223	0.84[AMR][1000 genomes]
rs1447224	0.84[AMR][1000 genomes]
rs1900542	0.90[AMR][1000 genomes]
rs34161656	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34422978	0.91[ASN][1000 genomes]
rs34484001	0.86[ASN][1000 genomes]
rs35199495	0.83[EUR][1000 genomes]
rs55937117	0.83[EUR][1000 genomes]
rs55999411	0.83[EUR][1000 genomes]
rs56108593	0.83[EUR][1000 genomes]
rs56282580	0.83[EUR][1000 genomes]
rs6432920	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6714497	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6724571	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs67300634	0.81[EUR][1000 genomes]
rs7422259	0.84[AMR][1000 genomes]
rs7581664	0.83[EUR][1000 genomes]
rs7592457	0.83[EUR][1000 genomes]
rs7594117	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532474	chr2:166993501-167548531	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv529384	chr2:167143465-167958752	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv2752480	chr2:167163493-167567493	Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv20938	chr2:167447880-167462030	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167451000-167451400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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