Variant report
Variant | rs12998867 |
---|---|
Chromosome Location | chr2:184508294-184508295 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11890491 | 0.83[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs11895524 | 0.83[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs13005966 | 0.98[ASN][1000 genomes] |
rs1349826 | 0.83[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs1377766 | 0.83[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs2123821 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2219101 | 0.81[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs2368424 | 0.82[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs34111270 | 0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[ASN][1000 genomes] |
rs34376551 | 0.85[EUR][1000 genomes] |
rs34701171 | 0.98[ASN][1000 genomes] |
rs34908147 | 0.97[ASN][1000 genomes] |
rs35056156 | 0.82[AMR][1000 genomes];0.91[ASN][1000 genomes] |
rs4666926 | 0.93[ASN][1000 genomes] |
rs56343602 | 0.85[EUR][1000 genomes] |
rs6710744 | 0.80[AFR][1000 genomes];0.86[EUR][1000 genomes] |
rs6758762 | 0.80[AFR][1000 genomes];0.85[EUR][1000 genomes] |
rs7569633 | 0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];0.98[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1012672 | chr2:184363204-184571778 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
2 | esv2757843 | chr2:184368473-184558908 | Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
3 | esv2759105 | chr2:184368473-184558908 | Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
4 | nsv428729 | chr2:184368473-184558908 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
5 | nsv583952 | chr2:184495927-184594404 | Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
6 | nsv869960 | chr2:184502527-184639318 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:184508200-184509000 | Enhancers | Fetal Heart | heart |