Variant report

Variant	rs13035717
Chromosome Location	chr2:181688436-181688437
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11892044	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11899268	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73974608	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7609144	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834475	chr2:181537463-181724891	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181688000-181689000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr2:181688000-181689000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr2:181688000-181689000	Enhancers	NHLF	lung
4	chr2:181688000-181689200	Enhancers	NHDF-Ad	bronchial
5	chr2:181688200-181688800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr2:181688200-181689000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr2:181688200-181689000	Enhancers	NHEK	skin
8	chr2:181688400-181688800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
9	chr2:181688400-181688800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr2:181688400-181689000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr2:181688400-181689000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr2:181688400-181689000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr2:181688400-181689000	Enhancers	HMEC	breast
14	chr2:181688400-181689000	Enhancers	HSMM	muscle
15	chr2:181688400-181689000	Enhancers	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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