Variant report

Variant	rs13059127
Chromosome Location	chr3:23106660-23106661
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs13062177	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13067021	0.87[EUR][1000 genomes]
rs13078875	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13090890	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13097096	0.86[EUR][1000 genomes]
rs1817581	0.80[AMR][1000 genomes]
rs2171030	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs2359460	0.82[ASN][1000 genomes]
rs4858470	0.82[ASN][1000 genomes]
rs603056	1.00[JPT][hapmap];0.83[MEX][hapmap]
rs861983	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23103200-23109200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:23105000-23109000	Weak transcription	Primary B cells from cord blood	blood
3	chr3:23105000-23109200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr3:23105000-23121400	Weak transcription	Psoas Muscle	Psoas
5	chr3:23105200-23108800	Weak transcription	Primary B cells from peripheral blood	blood
6	chr3:23105200-23108800	Weak transcription	Primary hematopoietic stem cells	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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