Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EPHB1-1	chr3:134498580-134498741	NONHSAT092251

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10935127	1.00[ASN][1000 genomes]
rs12486490	1.00[ASN][1000 genomes]
rs12489898	1.00[ASN][1000 genomes]
rs13075819	1.00[ASN][1000 genomes]
rs13075826	1.00[ASN][1000 genomes]
rs1447684	1.00[ASN][1000 genomes]
rs34011503	1.00[ASN][1000 genomes]
rs34337594	0.95[EUR][1000 genomes]
rs35026342	1.00[ASN][1000 genomes]
rs35100294	1.00[ASN][1000 genomes]
rs40526	1.00[CHB][hapmap]
rs4955449	1.00[ASN][1000 genomes]
rs4955481	1.00[ASN][1000 genomes]
rs4955484	1.00[ASN][1000 genomes]
rs59205084	1.00[ASN][1000 genomes]
rs6776848	1.00[CHB][hapmap]
rs71331775	1.00[ASN][1000 genomes]
rs71331777	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7340667	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7611548	1.00[ASN][1000 genomes]
rs7644265	1.00[ASN][1000 genomes]
rs984709	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877515	chr3:134460368-134591138	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134498400-134499400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:134498600-134499400	Enhancers	Fetal Intestine Large	intestine

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