The 2.0 version of rSNPBase

Variant report

Variant rs13077907
Chromosome Location chr3:87022039-87022040
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:86998800-87036000 Weak transcription Psoas Muscle Psoas
2 chr3:87007200-87026600 Weak transcription Esophagus oesophagus
3 chr3:87007200-87038400 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr3:87008000-87022600 Weak transcription HMEC breast
5 chr3:87008000-87028800 Weak transcription H1 Cell Line embryonic stem cell
6 chr3:87008000-87032000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:87008000-87034200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr3:87008200-87022600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr3:87011600-87022600 Weak transcription HUVEC blood vessel
10 chr3:87011600-87026600 Weak transcription Rectal Smooth Muscle rectum
11 chr3:87012600-87032600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr3:87012800-87022200 Strong transcription NH-A brain
13 chr3:87015000-87028400 Weak transcription H9 Cell Line embryonic stem cell
14 chr3:87015400-87027200 Weak transcription Hela-S3 cervix
15 chr3:87016200-87039000 Weak transcription Fetal Stomach stomach
16 chr3:87016800-87036800 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr3:87017000-87029400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr3:87017600-87039000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr3:87018200-87022800 Weak transcription Gastric stomach
20 chr3:87018200-87026800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr3:87018200-87032600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr3:87018200-87033600 Weak transcription A549 lung
23 chr3:87018400-87023000 Weak transcription Placenta Amnion Placenta Amnion
24 chr3:87018400-87036400 Weak transcription Fetal Intestine Large intestine
25 chr3:87018600-87023400 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr3:87018600-87026400 Weak transcription Adipose Nuclei Adipose
27 chr3:87018600-87026400 Weak transcription Aorta Aorta
28 chr3:87018600-87026600 Weak transcription Pancreas Pancrea
29 chr3:87018600-87034200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr3:87019000-87025600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr3:87019200-87025200 Weak transcription Fetal Muscle Trunk muscle
32 chr3:87019400-87026200 Weak transcription Colon Smooth Muscle Colon
33 chr3:87019400-87036600 Weak transcription Fetal Brain Male brain
34 chr3:87019600-87022600 Weak transcription Fetal Lung lung
35 chr3:87019800-87022600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr3:87019800-87026400 Weak transcription Ovary ovary
37 chr3:87020000-87022800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr3:87020000-87024400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr3:87020000-87026400 Weak transcription Fetal Muscle Leg muscle
40 chr3:87020400-87027200 Genic enhancers NHDF-Ad bronchial
41 chr3:87020600-87022400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr3:87020600-87022600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:87020800-87023400 Weak transcription NHLF lung
44 chr3:87021200-87023000 Weak transcription HSMMtube muscle
45 chr3:87021200-87023400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr3:87021600-87022800 Weak transcription Placenta Placenta
47 chr3:87021800-87022400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr3:87021800-87024600 Genic enhancers Osteobl bone
49 chr3:87021800-87024800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr3:87022000-87022800 Enhancers Muscle Satellite Cultured Cells --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015