Variant report

Variant	rs13087141
Chromosome Location	chr3:178571375-178571376
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs13064262	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13065598	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13079349	0.86[CEU][hapmap]
rs13081186	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13100117	0.86[CEU][hapmap]
rs34801218	0.88[ASN][1000 genomes]
rs61796573	0.92[ASN][1000 genomes]
rs9882743	0.86[CEU][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:178567200-178575000	Weak transcription	Right Ventricle	heart
2	chr3:178568000-178578200	Weak transcription	HSMM	muscle
3	chr3:178568200-178577400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr3:178569200-178572400	Weak transcription	HSMMtube	muscle
5	chr3:178569200-178572800	Weak transcription	Colon Smooth Muscle	Colon
6	chr3:178570400-178574600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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