Variant report

rSNPs within LD-proxies of this variant (count:28)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834630	chr3:21311619-21491327	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1006471	chr3:21385627-21596955	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv534005	chr3:21387588-22003293	Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv1000828	chr3:21399870-21565580	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv536515	chr3:21399870-21565580	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:21463000-21491400	Weak transcription	Aorta	Aorta
2	chr3:21477000-21491200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr3:21477000-21507200	Weak transcription	Fetal Muscle Leg	muscle
4	chr3:21483600-21491200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr3:21488400-21489400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr3:21488400-21489400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr3:21488400-21489400	Flanking Active TSS	NHDF-Ad	bronchial
8	chr3:21488400-21490200	Enhancers	HSMM	muscle
9	chr3:21488400-21491200	Weak transcription	Left Ventricle	heart
10	chr3:21488600-21489400	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr3:21488600-21489400	Active TSS	Adipose Nuclei	Adipose
12	chr3:21488800-21489400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr3:21488800-21489400	Active TSS	Stomach Smooth Muscle	stomach
14	chr3:21488800-21489800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr3:21488800-21490000	Enhancers	NH-A	brain
16	chr3:21489000-21489400	Enhancers	Fetal Kidney	kidney
17	chr3:21489000-21489400	Flanking Active TSS	Fetal Lung	lung
18	chr3:21489000-21489400	Enhancers	HSMMtube	muscle
19	chr3:21489200-21491200	Weak transcription	Ovary	ovary
20	chr3:21489200-21506600	Weak transcription	Fetal Stomach	stomach

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