Variant report

Variant	rs13105329
Chromosome Location	chr4:127673549-127673550
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:127672554..127674292-chr4:127695286..127696943,2	K562	blood:
2	chr4:127661132..127664302-chr4:127673229..127676858,3	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10518504	0.92[ASN][1000 genomes]
rs12502596	0.92[ASN][1000 genomes]
rs12513219	0.92[ASN][1000 genomes]
rs1388240	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1503617	0.92[ASN][1000 genomes]
rs1503625	0.83[ASN][1000 genomes]
rs17011514	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17011515	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17011535	0.92[ASN][1000 genomes]
rs17011594	0.92[ASN][1000 genomes]
rs34078351	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34402168	0.92[ASN][1000 genomes]
rs35077555	0.92[ASN][1000 genomes]
rs4833353	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4833354	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4834141	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55723347	0.82[ASN][1000 genomes]
rs56167450	0.92[ASN][1000 genomes]
rs62322164	0.92[ASN][1000 genomes]
rs62322165	0.92[ASN][1000 genomes]
rs62322169	0.88[ASN][1000 genomes]
rs62322174	0.89[ASN][1000 genomes]
rs62324179	0.90[ASN][1000 genomes]
rs62324220	0.93[ASN][1000 genomes]
rs62324222	0.93[ASN][1000 genomes]
rs62324225	0.92[ASN][1000 genomes]
rs6846559	0.86[ASN][1000 genomes]
rs72674475	0.92[ASN][1000 genomes]
rs72674499	0.92[ASN][1000 genomes]
rs7694191	0.97[ASN][1000 genomes]
rs951784	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012833	chr4:127468474-127760933	Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv537242	chr4:127468474-127760933	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv524850	chr4:127470903-127768849	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv1007477	chr4:127561735-127726291	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv537244	chr4:127561735-127726291	Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv879907	chr4:127646765-127709859	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
7	nsv879908	chr4:127646765-127749390	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
8	nsv879909	chr4:127646765-127792639	Enhancers Weak transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	nsv879910	chr4:127646765-127805466	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	nsv879911	chr4:127646765-127835677	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:127671600-127673600	Enhancers	Fetal Heart	heart
2	chr4:127671800-127677000	Enhancers	K562	blood
3	chr4:127672200-127677200	Weak transcription	Fetal Lung	lung

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